Xenopus laevis (African clawed frog): 432350
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Entry
432350 CDS
T01010
Symbol
srsf5.S
Name
(RefSeq) serine/arginine-rich splicing factor 5
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03040
Spliceosome
xla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
432350 (srsf5.S)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
432350 (srsf5.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
432350 (srsf5.S)
Spliceosome [BR:
xla03041
]
Common components
Common spliceosomal components
SR proteins
432350 (srsf5.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Nup35_RRM_2
DbpA
Motif
Other DBs
NCBI-GeneID:
432350
NCBI-ProteinID:
XP_018087459
Xenbase:
XB-GENE-865668
UniProt:
A0A1L8EZQ9
A0A974C1Z2
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All DBs
Position
8S:3833002..3838591
Genome browser
AA seq
280 aa
AA seq
DB search
MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDARDADDAVYELDGK
ELCNERVTIEHARLRSRGGGGGGGGGGPRGMGRGRYNDRFSSRRPRGDRSAPPIRTENRL
IVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEIN
GRKIKLIEGNKRHSRSRSRSRSRSRSSSRSRSRSRSRSRKSYSRSRSRSRTPRSNRSKSR
SVSRSPVPEKSQKSRSPSKSPASVDRQKSRSRSRSADSRN
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctgcagagtgtttattggcaggctcaacccagctgccagggagaaagatgtc
gagcgcttcttcaagggttacgggcgtatccgcgatatcgacttgaaaagaggctttgga
tttgtggagtttgatgatgccagagatgcagatgatgcagtctatgagcttgatggcaaa
gagctgtgtaatgagagagttacaattgaacatgctcgtcttcgttctcgagggggagga
ggaggaggtggtggtggtggtccaaggggaatgggcagaggaagatacaatgaccgtttc
agtagtcgccgaccccgtggagatagaagtgctccaccaataaggacagagaatcgcctt
atagtagaaaatctgtcctcaagagtcagctggcaggacttgaaggatttcatgagacaa
gctggagaagttacatttgcagacgcacaccgaccaaagcttaatgaaggggttgttgaa
tttgcatcctacagtgatttaaaaaatgccattgagaagctttctgggaaggagattaat
ggcagaaaaataaagctaattgaaggaaataaaagacacagtcggtcaaggagcagatca
cgttcccgcagcagaagttcatccaggtcccgaagccgctcccgctccaggagccgaaag
tcttacagccgatcccgtagccgcagtcgtactccccgcagcaaccgtagcaaatccagg
tctgtgagtaggtcacctgttcctgagaagagccagaaatcaagaagcccatccaaatca
cccgcatcagttgataggcagaaatctcgatccagatctcggtctgctgatagtagaaac
tga
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