Xenopus laevis (African clawed frog): 443589
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Entry
443589 CDS
T01010
Symbol
prpf3.S, prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
443589 (prpf3.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
443589 (prpf3.S)
Spliceosome [BR:
xla03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
443589 (prpf3.S)
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Peptidase_C1_2
Motif
Other DBs
NCBI-GeneID:
443589
NCBI-ProteinID:
NP_001085273
Xenbase:
XB-GENE-996794
UniProt:
Q2TAV4
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Position
8S:complement(95880834..95907244)
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AA seq
679 aa
AA seq
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MALSKRELDDLKPWVEKTVKGVLGFSEPTVVTAALNCVGKGMDKKKTVDHLKPFLDDSTY
RFVDKLFDAVKEGRSSRHSRSSSDRGRKRELKEVFGDEPDLSKDSSNSKKKRIPRFSEVE
EEPEVIPGPPSESPGMLTKIQIKQMMESATRQIEERKKQLSFVSPPPVKVSSGQSERSSI
GNTIQPSQAATFMNDAIEKARKAAELQARIQAQLSLKPGLVGNTNMVGLANLHAMGIAPP
KVELKDQSKPTPLILDDQGRTVDAMGKEIELTHRMPTLKANIRAVKREQFKLQLKEKPSD
DLEANTFFDSRVSIASSQRQRRLFKFHEKGKFEKIAQRLRTKSQLEKLQSEIAQAAKKTG
IQTSTRLAMIAPKKELREGEIPEIEWWDSFIIPNGTELTEEVLLKREDFHGITNLVEHPA
QLSPPVDKDAPVTLGIYLTKKEQKKLRRQTRREGQKELQEKVRLGLMPPPEPKVRISNLM
RVLGTEAIQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKEKKVKKLKEDISQGIH
VSVYRNLSNPSKKFKIEANANQLYLTGVVVLHKDVNVVVVEGGPKSQKKFKRLMLSRIKW
DEQTTNSKGKDNDESDEESVPKANRCTLVWEGTTKERSFGDMKFKQCPTENMAREHFKKL
GAEHYWDLALSQSVLETAD
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcgctttctaagagagaactggatgacttgaagccatgggtagagaaaactgtgaaa
ggagtcctgggcttctctgagcctacagtggtcactgccgctctgaactgtgtcgggaaa
ggaatggacaagaagaagacggttgatcatctgaaaccatttttagacgactccacgtac
cgttttgtggataagttgtttgatgcagtaaaggaaggccgtagctcaaggcattcgaga
tctagcagtgacagaggcagaaaacgggagttgaaagaggtgtttggtgacgagccagac
ctttccaaggattcctccaattccaagaaaaagcgaataccgcgtttttcagaagtagag
gaggagccagaagtgataccaggccctccctcagaaagcccaggaatgctgactaagata
cagattaaacaaatgatggaatcagcaacacggcagattgaagagaggaaaaaacaactg
agctttgtcagccccccaccagtgaaagtctcatcagggcagtcggagcgttccagcata
gggaacaccatacagccttcccaggcagctacctttatgaacgatgccatagagaaggcc
aggaaagctgccgagctgcaggccagaatccaggctcaactttctttaaaaccaggactc
gtaggaaatacaaacatggttgggctggctaaccttcatgccatgggaattgcacctcct
aaagtggagttaaaggaccagtccaagcccacaccattaattttagatgaccaaggccgc
actgttgatgcaatgggaaaggagattgagctgacccaccgcatgcccacgttgaaagcg
aacattcgggctgtgaaaagggagcagttcaaactgcagctgaaggaaaaaccttcagac
gacttggaggcaaatacattttttgactccagagtttccattgcctcttctcagcgccag
agaaggttgtttaaattccatgaaaagggcaagtttgagaagattgcccaacgacttcgg
acaaagtcacaacttgagaaactgcaatctgaaattgcccaagctgcaaagaaaaccggt
atccagacatcaacaaggcttgccatgattgcccccaaaaaggagctgcgagaaggcgag
atccctgaaatagagtggtgggactctttcatcatccccaacggcacagaactgacggaa
gaggttttattaaaaagagaggattttcacggcatcacaaaccttgtggagcacccagca
caactcagccccccagttgacaaagatgctccagtgacgctaggaatttacctaacgaaa
aaggaacagaaaaagttgcgccgacagactaggagagaaggacagaaagagttacaagaa
aaggtgcgcctgggtcttatgcccccgccagaacccaaggtgagaatatcaaatctaatg
cgagttttgggaaccgaagcaatccaggatcccacgaaagtagaggcacatgtccgagcg
cagatggcaaagcgccagaaggcccatgaagaggcaaacgcagctagaaaactcacagca
gaacagaggaaagagaagaaagtaaagaagctcaaggaagatatttcccaaggaattcat
gtttctgtatatagaaatctgagcaacccatccaaaaagttcaagatcgaagccaacgca
aatcagctgtatcttacaggagtggtggttttacataaagatgtcaatgtggtggtcgtg
gaaggcggtcccaaatcacagaagaaattcaaacggttaatgcttagtagaataaaatgg
gatgagcagacaacaaacagtaagggaaaagataatgatgaatctgatgaagaatccgta
cctaaggcaaacaggtgcacattagtgtgggagggtacaactaaggaacgcagcttcgga
gacatgaagttcaaacagtgccccacagagaatatggctcgggaacattttaagaaactt
ggagcggagcattactgggacctggcactaagtcagtctgttttggaaactgcagactga
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