Xenopus laevis (African clawed frog): 443622
Help
Entry
443622 CDS
T01010
Symbol
cnot2.S
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
443622 (cnot2.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
443622 (cnot2.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
443622 (cnot2.S)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
443622 (cnot2.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
443622
NCBI-ProteinID:
XP_018111448
Xenbase:
XB-GENE-991723
UniProt:
A0A974DAY4
A0A1L8GUI7
LinkDB
All DBs
Position
3S:complement(88611222..88651943)
Genome browser
AA seq
520 aa
AA seq
DB search
MFGASRKKFVEGVESDYHDENMYYSQSSMFPHRSEKDMLASPSPSASGQLSQFGASLYGQ
QSALGLPMRGMSNNTPQLNRSLSQGTPLQNHVTPTTGVPTMSLHTPPSPNRGILPMNPRN
MMNHSQVGIGIPSRTNNMSSSGLGSPNRSSPSIICMPKQPPSRQPFTVNSMSGFGMSRNQ
AFGLNNSLSNNIFNGTDGSENVTGLDLSDFPALADRNRREGSGNPTPLINPLAGRAPYVG
MVTKPASEQSQDFSIHNEDFPALPGSSYKDPTSGNDDSKSNLNTPGKTASSTDGPKFPGD
KSSTTQNNNQQKKGIQVLPDGRVTNIPQGMVTDQFGMIGLLTFIRAAETDPGMVHLALGN
DLTTLGLNLNSPENLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGRYG
EDLLFYLYYMNGGDVLQLLAAVELFNRDWRYHKDERVWITRAPGMEPTMKTNTYERGTYY
FFDCLNWRKVAKEFHLEYDKLEERPQLPSTFNYNPAQQAF
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgcttcaagaaagaagtttgtagaaggggtcgaaagtgactaccatgatgag
aatatgtattatagccagtcttcgatgtttccacatcggtcggagaaagatatgctggca
tctccatcaccatctgcatcgggtcaactgtcacagtttggggccagtttatatggacaa
caaagtgcactaggccttccaatgagggggatgagcaacaatactcctcagttaaaccgc
agcttatctcaaggcactccgttacagaaccatgtaacgcctactacaggggtaccaaca
atgtcacttcatacaccaccatctccgaacaggggtattttgccgatgaatcccaggaat
atgatgaaccactcccaggttggcattggaattcctagcaggacaaataacatgagcagt
tcagggttaggcagtcctaacagaagctcacccagcataatatgtatgccaaagcagcca
ccatcccggcagccttttactgtgaacagtatgtctgggtttggaatgagtaggaatcag
gcttttggtttgaacaattctttatcgaataacatatttaatggaacagatggaagtgaa
aatgtgaccggactggacctctcagattttccagcattagcagatagaaatcgaagggaa
ggtagcggcaaccctactcctttaataaatccattagccggaagggctccttatgttgga
atggttacaaaaccagcaagtgagcagtcccaagacttctcgatacacaacgaggatttt
cctgcattaccaggttccagctataaagatccaacatcgggcaatgatgatagcaaatct
aatttaaatacaccaggaaagactgcctcaagtacagatgggcccaaattccctggagac
aaaagttccacaacgcaaaacaacaaccagcagaaaaaaggcattcaggtcttgccagac
gggcgagttaccaacattcctcaaggcatggtaacagatcagtttggcatgattggcttg
ttaaccttcatcagggcagcagaaacggatccaggaatggtacaccttgcattaggaaat
gacttgacaacactaggcctcaatctgaattctcctgaaaatctatatccaaaatttgca
tcaccgtgggcgtcttcaccctgtcgacctcaagacatcgatttccatgtaccctcggag
tatttaacaaatattcatattagggataagttggctgcaataaaacttggccgatatgga
gaagacctacttttctatctctattacatgaacggaggagatgttttacagcttttagcc
gcagtggagcttttcaacagagactggagatatcacaaagatgagcgagtatggattacc
agggcacctggaatggaaccaacaatgaagaccaacacatatgagaggggaacatattac
ttctttgactgtcttaactggagaaaagtagctaaggagttccatttggaatatgacaag
ctagaagaaaggccccaactgccatccaccttcaattacaatcctgctcagcaagccttc
taa
DBGET
integrated database retrieval system
