KEGG   Xenopus laevis (African clawed frog): 443636
Entry
443636            CDS       T01010                                 
Symbol
cdc5l.L, cdc5l
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    443636 (cdc5l.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xla03041]
    443636 (cdc5l.L)
   03400 DNA repair and recombination proteins [BR:xla03400]
    443636 (cdc5l.L)
Spliceosome [BR:xla03041]
 Complex B
  Other components
   Prp19 complex
    443636 (cdc5l.L)
 Complex C
   Prp19-CDC5 complex
    443636 (cdc5l.L)
DNA repair and recombination proteins [BR:xla03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    443636 (cdc5l.L)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C
Other DBs
NCBI-GeneID: 443636
NCBI-ProteinID: NP_001131045
Xenbase: XB-GENE-983559
UniProt: A1A5J6 A0A8J0QC59
LinkDB
Position
5L:complement(159850791..159905856)
AA seq 804 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEYLLDKAAQRDNEEETADDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIDIQKKRKKKRGVDYNAEIPFEKKPAPGFYDTSEENYDALNADFR
KLRQQDLDGDLRSEKEAKDRKKDKQNIKRKKESDLPSAILQTTGGASQLTKKRSKLVLPS
PQISDAELEEVVKIGQASEIARQTAEESGITNSASSTLLSEYNVANNSVALRTPKTPAAQ
DRILQEAQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSQS
SEGITPRGGMTPKPVIGATPGRTPLRDKLNINPEDGTVDYNDPSYIKQMERESREHLRLG
LLNLPAPKNDFEIVLPENAERELEDRDQDDSIIEDAADIEARKQAMREAQRAKELKNRHK
AVQKALPRPSEVNETILRPVNVEPPLTDLQKSEEMIKKEMIVMLHYDTLHHPYADNVGGK
RGKVPGSAAANAESIAFLEHMPFVKYSKEELKQAEEVLQQEMEVVKQGMGHGDLSIDSYN
QVWEECYSQVLYLPGQGRYTRANLASKKDRIESLEKRLEINRGHMTAEAKRAAKMEKKLK
ILLGGYQSRAMGLIKQLNEIWDQYEQANLELGTFEELKVHEDTAIPRRIECLKEDVQRQE
ERERELQQRFAELMLEKESYEAIL
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgccgcgtattatgataaaaggcggggtgtggcggaacacagaggatgaaattctcaaa
gcggctgttatgaaatatgggaaaaaccagtggtctcgaattgcttctttgctgcacaga
aaatcggccaaacagtgcaaagcccgatggtatgaatggcttgacccgagcatcaaaaag
acagaatggtctcgggaagaagaggagaaattacttcatttggccaagctgatgccaact
cagtggaggacaattgctcctatcataggaagaactgcagcccagtgcctggagcactat
gaatatttgctagataaagctgctcagcgagacaatgaagaggagaccgcagacgaccct
cgcaagctgaagccaggagaaattgatccaaatcccgaaacaaaaccagcgaggccagat
ccagtggacatggatgaagatgaacttgagatgctttcagaggctagagctcgtcttgcc
aacactcaaggcaaaaaagccaagaggaaagcaagagaaaaacagctggaagaagccagg
cgtcttgcagcccttcagaagaggagagagcttcgtgctgccggcattgatattcagaag
aagaggaaaaagaaacgtggagtggactacaatgcagaaattccttttgaaaagaagccg
gcgccagggttctacgatacatctgaagaaaactatgatgccttgaatgccgacttcaga
aagctccgtcagcaagacctggatggcgacctgagatcagaaaaagaagcaaaggaccgg
aagaaagacaaacagaacattaaaaggaaaaaggaatctgatttgccgtctgccattctt
cagacaactgggggagcctcgcaacttactaagaagagaagtaaattggttctcccttct
cctcagatttcagatgctgaactggaagaagtggtaaagattggacaagccagtgaaatc
gctcggcagacggcagaggagtcgggtataaccaattctgcgtccagcacgttactgtca
gaatacaatgtcgccaataatagcgtagccctcaggactcccaagactccagcagcgcaa
gaccgcatactgcaggaagcgcagaatttgatggccctcaccaacgtggatacgccatta
aagggagggctgaacactcctcttcatgaaagtgatttttcaggagttacaccacagaga
caagtggtacagacacccaacactgtgctgtccacaccattcagaactccgtcccagagc
tccgaaggaataacccctcggggtggcatgactcccaaaccagttattggggctacccct
ggaaggactcctctgcgagacaagctgaatattaatcctgaggatgggacagtggattat
aacgacccatcttacataaaacagatggaaagggaatctcgggagcacctgcgccttggt
ttgctcaatcttccggccccgaaaaatgactttgagatcgtactgccggaaaacgcagag
cgggagctggaggatcgagatcaggacgattccattatagaagatgctgccgacatagag
gccagaaagcaggcgatgagagaagcgcagcgagcaaaggagctcaaaaacagacacaaa
gcagtgcaaaaggctttaccccgaccatcagaggtgaatgaaactattctgaggcctgta
aatgtagagcctccacttacagatttgcagaaaagtgaagagatgatcaaaaaggaaatg
attgtgatgctgcattacgataccctccaccatccttacgcggataatgtaggagggaag
agagggaaggtgcctggctcagcagctgccaacgcggaaagcattgcctttctggaacac
atgccatttgtaaagtatagtaaggaggaactcaagcaggcagaggaagtcctgcaacaa
gagatggaagtggtgaagcaaggtatgggccacggggacctctcgattgactcgtacaac
caggtgtgggaggagtgttatagtcaggtgttgtaccttcctggacaaggccgctacaca
cgggccaacctggccagcaaaaaggacaggattgaatcacttgagaagagactagagata
aacagaggtcacatgacggcagaagccaaaagggcagccaaaatggagaagaaactgaag
atcttgctcggtggctaccagtcccgggccatggggctcatcaaacagctgaatgagatt
tgggatcagtacgaacaggccaacctggaattgggaactttcgaagaacttaaagtgcat
gaagataccgccattccaagaaggatagagtgtctgaaagaggacgtccagcgacaggaa
gagcgagagagggaactgcagcagagatttgccgagcttatgctggagaaagaaagctac
gaagccatactgtga

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