Xenopus laevis (African clawed frog): 443642
Help
Entry
443642 CDS
T01010
Name
(RefSeq) caldesmon isoform X3
KO
K12327
caldesmon
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
443642
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
443642
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
443642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
443642
NCBI-ProteinID:
XP_018110356
UniProt:
A0A1L8GQZ6
A0A974HQH8
LinkDB
All DBs
Position
3S:complement(7978324..8065536)
Genome browser
AA seq
827 aa
AA seq
DB search
MDDFERRRELRRQKREEMRQETERLTYQRNDDDDEEAARERRRRARQERQSLQKDYVGDG
TEVNSQNSVTTETTRTSTNTSTDISLDDEAALLERLAKREERRQQRLKEALERQKEFDPT
ITDETLSSSKYNRNGQHEVEENHISAKEDDSVTHRSQYEVEETEIVTTSYQKNDSRKEVQ
EEVQTEKTEEKEEEPVETQQENLIKNNQVEVTFELKSSDHEARVINLEISVDRGESELRE
DDERKAEEKRIEEEARREAVERERAEAERKSAEERERLEAERLATEEKERLEAERKAAEE
ERERCEAEAKREAEQREKEQAEAEERERQRQQEESKLAEESAEAERKAQEERERVLAEKK
KAEEEKLRLEAEQSKAAEEKKKAEEKRLEEARERKKAEEKKAAEERERKKAEEKKAAEEK
DRKKAEEEKARLEAKKKEEKQDKKDKTQPAFLRKQGEDKEAKVDSKMDKITDEKPRAGFR
KEEVKEEKAKGQKEDLKASWERKKDIPETKAHNGESGHERAPQKLKQLEKFGGTKSHPTP
DETDSVSKIEADKRLDDLRRRRGETESGEFDKLKQKQQEAAVELEELKKKREERRKIMEE
EEQRKKQEEAERKTKEEEEKKRLKEEIEKRRAEAAEKRKNMPEDGLSEEKKPFKCFTPKG
SSFKIEERAEFLNKSAQKSSKSTQSAAAVSKIDSRLEQYTSAIGSNKSAKPSKTAPSDLP
LPADGIRNIKSMWEKGNVFSSPSGALSPNKETANIKVGVSSRINEWLTKTPETNKATPSK
PSDLKPGDVSGKRNIWEKPEEKPGSPTKVTVGGKKPDRNGLRFEKEP
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggatgattttgagcgtcgccgggagctcaggagacagaagcgggaggaaatgcgtcag
gaaacggagaggttgacctatcagagaaacgatgacgatgatgaagaagctgcaagggaa
cgccgtcgccgtgctcgccaagagagacaaagcttgcaaaaggattatgtcggagatggg
acagaagtcaactctcaaaatagtgtcacaactgagaccactaggacatcaacaaataca
agcactgatatttcattggacgatgaagccgctctcttggaaagactggcaaagagagaa
gagaggcgccagcaacgcctgaaagaagccttggaacggcagaaagagtttgatccaaca
ataacagatgaaacattgtcctcatcaaagtacaacagaaatggacaacatgaagtggag
gaaaaccacatctccgcaaaagaggacgactctgtaacccatcgatcccagtatgaagtt
gaggaaactgaaatagtgacaacgtcctaccaaaagaatgacagcaggaaggaagtacaa
gaggaagtgcaaactgaaaaaacggaggaaaaggaagaagagccagtcgagacacaacaa
gaaaatctcattaagaacaatcaggtagaagttacttttgaactgaaaagttcagaccat
gaagctagagtaataaatttagaaataagtgtggacagaggtgagtcagaacttagggaa
gatgatgagaggaaagctgaagagaaaaggattgaggaagaagctagaagagaagcagtg
gaaagggaaagggctgaggcagagagaaaatcagcagaagaaagggaaaggcttgaggca
gagaggttagctactgaggaaaaggaaagacttgaagcagagagaaaagctgcagaagaa
gaaagagaaaggtgtgaagcagaggcaaaacgggaagcagaacaaagagaaaaagagcaa
gctgaagcagaagagagggaaaggcagaggcagcaggaagagagtaaattagcagaggaa
agtgcagaagctgagaggaaagcacaagaagaaagggaaagggtattggcagagaagaaa
aaagcagaggaagaaaaattaaggctggaggcagagcaaagcaaagcagcagaggagaag
aaaaaggcagaggagaaaaggttagaggaagcaagggaaagaaaaaaggcagaggagaaa
aaggcagcagaagaaagggaacggaaaaaggcagaggagaaaaaagctgcagaggagaaa
gacaggaaaaaggcagaagaagagaaggcaaggttagaggccaaaaagaaagaggaaaag
caagacaagaaggacaagacccaacctgccttcttaaggaaacagggagaagacaaagaa
gcaaaagtggattctaaaatggacaaaatcacagatgagaaaccacgagcaggcttccga
aaagaggaggttaaggaagagaaagccaaaggtcaaaaggaagatctgaaggcaagctgg
gaacggaagaaagacattccagagaccaaggcacacaatggagaaagtggacatgagcgt
gctccccagaagcttaaacagcttgagaaatttggtggcacaaaatctcatccaactcct
gacgaaactgattcagtatccaaaattgaagcggataagagactggatgatcttcgtcgg
cgccggggggaaaccgagagtggagagtttgataaattaaaacagaagcaacaggaagcc
gcggtggaactagaagagttgaaaaaaaagcgtgaggaacgccggaagataatggaggaa
gaggagcagagaaagaaacaggaagaggcagagagaaaaactaaggaagaggaagaaaag
aagagattgaaagaagagattgaaaagagaagagctgaggctgctgagaaacgaaaaaat
atgccggaagatggtttatcagaggagaagaaaccctttaagtgcttcacaccaaagggt
tcatcttttaagattgaagaacgagcagagttcctcaacaagtctgcacaaaaaagttcc
aaatcaacgcagtccgcagcagctgtatctaagattgacagcagacttgagcaatacacc
agtgcaattgggagtaacaagagtgccaagccttccaaaactgcgccctctgacctgccc
ttgccagcggatggtattcgtaatataaagagcatgtgggagaaagggaatgtcttctca
tcgccaagtggagctttgtcgccaaacaaggaaacggcaaacataaaagttggtgtttca
agtcgcattaatgagtggctcacaaaaacaccggagaccaacaaggcaaccccctctaaa
ccttccgatctaaaacctggagatgtatctggaaaacgcaatatttgggagaaaccagag
gagaaacctggatctccaactaaggtgacagttggaggaaagaaacctgatagaaacggt
ctgagatttgaaaaagagccatag
DBGET
integrated database retrieval system