Xenopus laevis (African clawed frog): 443770
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Entry
443770 CDS
T01010
Symbol
trmt13.L, ccdc76, trmt13
Name
(RefSeq) tRNA methyltransferase 13 homolog (S. cerevisiae) L homeolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xla03016
]
443770 (trmt13.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
443770 (trmt13.L)
Transfer RNA biogenesis [BR:
xla03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
443770 (trmt13.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Motif
Other DBs
NCBI-GeneID:
443770
NCBI-ProteinID:
NP_001085344
Xenbase:
XB-GENE-984695
UniProt:
Q6GR24
A0A974D623
LinkDB
All DBs
Position
4L:105268731..105283360
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AA seq
467 aa
AA seq
DB search
MDPQEPQPSAASEPDSSLVTCPRENPLPGRCSHFVQRKKRFCKMIVSEGKKFCGEHAQSG
EEHDSRRRIPCPLDPKHTVYEDQLPKHLKKCNSREKPKPVFYVQDVNAGCRITESTNDLI
SLSSFSKDELLKLTEKLKQVTSGLDPPSADKKLCHWSLLEALNDPANGDTASKHLKQQAS
ILGHLDSLGLLGGSRCFVEFGAGRGKLSHWVDIATQGAENIHFLLVERASTRFKVDGKQR
SSVFERLQIDIQHLCLDRVPSLSQKHLPVIGIGKHLCGAGTDLALRCLMQSNFPATAEPL
PKRPRTDHLQQETVKNEGKEAYPVSSACAGGIVIALCCHHRCDWHHYVGREFFQSLGLDQ
REFNLFQRMSSWATCGMRKLPAKAIQSDEQMESEEHDAEQQNLDCHSETVEGFLTVKERE
NLGRLCKLLIDYGRVDYLQRMGYIAALQYYTEPEVSLENVLLTAVPR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggatcctcaggagccccagccatctgctgcttctgagccggattcttccttagtgaca
tgtcccagagagaatccccttcccgggaggtgcagtcactttgtgcagaggaaaaagaga
ttctgcaaaatgatcgtctctgagggaaagaagttctgcggagaacatgctcagagcggg
gaggagcatgacagcaggaggcggattccatgccctctggaccccaagcacacagtgtac
gaggatcagcttccaaagcacctcaagaaatgtaattccagagagaaacccaagcctgtc
ttttatgttcaagatgtgaatgcagggtgccggatcacagagagcactaatgatctgata
tctcttagttccttctctaaagatgagcttctgaaacttacagagaagctgaaacaagtg
actagtggcctagaccctccatcagcagataagaaactatgtcactggtctttacttgaa
gccttgaatgatccagcaaatggagacactgcatctaagcatctcaagcagcaggcctcg
attctgggacacctggacagtctgggtttgctgggtggatctcgttgttttgtagaattc
ggtgctggacggggcaaactctcccactgggtggatattgcaacacagggtgctgaaaac
attcacttcctgctggtggaaagagcatccactagatttaaggtggacgggaagcagaga
agttcggtttttgagagacttcaaattgacattcagcatctttgtttagatcgagttcct
agccttagtcagaagcaccttccagtcattgggattgggaaacacctttgtggagcaggg
acagacctggcactgcgctgtctcatgcagagtaactttcctgccaccgctgaacctttg
ccaaaaagacccaggacagatcatttgcagcaggaaacggtaaaaaatgaaggcaaggaa
gcatatccagttagttctgcctgtgcgggaggcattgtcattgctctttgttgtcaccat
cgctgtgactggcatcactatgtaggcagagagttcttccaaagtctaggactggatcag
agggaattcaacctttttcagcgcatgtccagttgggctacctgtggtatgaggaaactg
ccggccaaagccatccagtctgatgaacagatggagtcagaggaacatgatgcagagcaa
cagaacctagactgtcattcagagacagttgaagggtttctcacagtgaaggagagggag
aacttggggcgactgtgcaagctactcatagactacggacgtgtagattacctacagcgt
atgggatacattgcagcattgcagtattacacagagcctgaagtgtctctagagaatgtt
ttgctcacagcagtaccacggtaa
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integrated database retrieval system
