Xenopus laevis (African clawed frog): 443771
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Entry
443771 CDS
T01010
Symbol
irf6.S, irf-6, irf6, irf6.1, xIRF-6
Name
(RefSeq) interferon regulatory factor 6 S homeolog
KO
K10154
interferon regulatory factor 6
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
443771 (irf6.S)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xla04147
]
443771 (irf6.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
443771 (irf6.S)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
443771 (irf6.S)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
443771
NCBI-ProteinID:
NP_001085345
Xenbase:
XB-GENE-876421
UniProt:
Q6GR23
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Position
5S:75590575..75605915
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AA seq
460 aa
AA seq
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MAIHPRRVRLKPWLVAQVDSGMYPGLIWLNREAKRFQIPWKHATRHSPQQEEENTIFKAW
AVETGKYREGADEPDPAKWKAQLRCALNKSREFKLMYDGTKEVPMNPVKIYEVCDIPQSQ
GSIINPGSTGSIPWDDDEFEEDELNKSQNHVPISEPFNCLNINADSPMGSSSTGSCTPEQ
TWPKTEPQEMEVPPTAGPADFFSSPEMWISSLPMTDLEVQFFYRGKEIGQTMIVSNPQGC
RLFYGHLGPMPNQEELFGPITLEQVRFPGTEQIVNEKQKLFTKRLLDVMDRGLILEVSGH
AIYAIRLCQCKVYWSGPCSPSQTTPNLIERQKRVKLFCLETFLSDLISHQKGIITKQPPY
EIYLCFGEEWPDGKSKERKLIIVQIIPVVARMILEMFSGDSTRSFDSESIRLQISVPDIK
DNIVAHLKQLYRFLQNHQGPDAWPLMQPQNLHLTHMLQAQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggctatacacccccgtcgtgtccggctaaaaccatggctggtggctcaggtagatagt
ggaatgtaccctggtctcatctggttaaacagagaagccaaaaggttccagatcccctgg
aaacatgccacaaggcatagcccccagcaggaagaagagaacacaatatttaaggcctgg
gctgttgagacaggcaaatacagagaaggagctgatgaaccagacccagccaagtggaag
gcccagctgcgctgtgcactaaacaagagcagagaatttaaacttatgtatgatgggacc
aaagaggttcctatgaacccagtcaaaatctacgaggtctgcgacatcccccagtctcaa
ggatctatcatcaacccaggttccaccggatctataccatgggatgatgatgagtttgaa
gaagacgagctaaataagtctcagaaccatgtaccaatcagtgagccctttaactgtctg
aatattaacgcagactcgcccatgggatcatctagcacaggcagctgcacccctgagcaa
acatggccaaagactgagcctcaggaaatggaagtgcccccaacagcagggcctgctgat
tttttcagttctccagagatgtggatcagttccctaccaatgacagacttagaagtccag
tttttctaccgagggaaagagattggccagacaatgatagtcagtaaccctcaaggctgc
cggcttttctatggtcacctggggccaatgcccaatcaggaagagctgtttggacccatc
actcttgaacaggttcgctttcctggaacagagcaaattgtaaatgaaaaacagaagctc
tttactaagcgtctccttgatgtcatggacaggggtctgatattagaggtcagtgggcat
gccatttatgcaatcagactgtgccagtgtaaagtctactggagtggaccctgctcacca
tctcaaactaccccgaaccttattgaaagacagaagagagttaaacttttctgtctggag
acttttctaagtgatcttatttcacaccaaaagggaatcataacaaaacaaccaccctat
gaaatctacttgtgctttggagaagaatggccagatggcaaatctaaagaaagaaagctc
atcattgttcagatcataccagttgtagcacgtatgatacttgagatgtttagtggggat
agcacccgttcctttgatagtgaaagcattcgtctgcaaatctctgtccctgacatcaaa
gacaacattgttgctcacctgaaacagctctatcgttttcttcagaaccatcaaggccca
gatgcttggcctctcatgcagccccaaaacttgcatctgactcacatgctccaagcccag
tga
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