Xenopus laevis (African clawed frog): 443807
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Entry
443807 CDS
T01010
Symbol
srsf5a.S
Name
(RefSeq) serine/arginine-rich splicing factor 4 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03040
Spliceosome
xla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
443807 (srsf5a.S)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
443807 (srsf5a.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
443807 (srsf5a.S)
Spliceosome [BR:
xla03041
]
Common components
Common spliceosomal components
SR proteins
443807 (srsf5a.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
OB_RNB
Motif
Other DBs
NCBI-GeneID:
443807
NCBI-ProteinID:
XP_041431192
Xenbase:
XB-GENE-6251747
UniProt:
A0A1L8EZK9
LinkDB
All DBs
Position
8S:2824045..2844616
Genome browser
AA seq
261 aa
AA seq
DB search
MSGSRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK
VLCNERVTIELARNRRGRGGMMGGGGGRYPNRFAYRQSNSGGPSRYGPPVRTEHRIIVEN
LSSRVSWQDLKDFMRKAGEVTYVDAHRSNRNEGVVEFASYSDMKSALDKLDGVELSGRKI
KLTEDSKKHRSRSRSRSRSRSRSRSKSKSRGSSKSASRSRSKSRTPERKYSQKNNSAEPA
QGSPPPRSKRQSRSSSADSRN
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcagccgtgttttcattgggagactgagtcctcatgccagagagagggatgtg
gagaaattctttaaaggatatggacgcatcagggaaataaatctgaagaatggatttgga
tttgtggagtttgatgatcacagagatgctgacgatgctgtatatgaactgaatggcaaa
gtactgtgcaatgaaagggtgacaattgagcttgcaaggaaccgcagaggaagaggtgga
atgatgggaggtggaggcgggaggtatccaaatcgctttgcttatcgccagtccaatagt
ggtgggcccagtagatatggaccacctgttcgtactgagcacagaattatagtagaaaac
ctctcgtcccgtgtcagttggcaggatctaaaggatttcatgaggaaggccggagaggta
acttatgtggatgcccatcgaagtaacagaaatgagggggttgtggaattcgcatcttat
tctgatatgaagagtgctttagataaactggatggtgtagaactgagtgggcgcaaaatt
aaacttactgaggatagtaagaaacacagaagtagatcaagatcaagatcacgaagtcgc
tcaaggtctcgcagcaagtctaaatctcgcgggtcctccaaatctgcaagtcgatccaga
tccaaaagccgtacacctgagagaaaatactcacagaaaaataactctgcggagccagcg
cagggctccccaccaccacgctccaagcgccaatccagatcaagttcggcagatagtcgt
aattaa
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