KEGG   Xenopus laevis (African clawed frog): 443865
Entry
443865            CDS       T01010                                 
Symbol
exosc9.L, exosc9, scl75
Name
(RefSeq) exosome component 9 L homeolog
  KO
K03678  exosome complex component RRP45
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    443865 (exosc9.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    443865 (exosc9.L)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     443865 (exosc9.L)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C hSH3
Other DBs
NCBI-GeneID: 443865
NCBI-ProteinID: NP_001085439
Xenbase: XB-GENE-992916
UniProt: Q6GQJ3
LinkDB
Position
1L:complement(70590225..70597791)
AA seq 431 aa
MKETPLSNCERNFLLQAITEKKRLDGRQTYDYRNIKIAFGTDYGCCIVELGKTRVLCQVS
CEIVTPKMSRPTEGILFFNLEISPMAFPGFEMGRQSELSVKLNRLLERCLRNSKCIDTES
LCVAAGEKVWQIRVDLHLLNHEGNIIDAASIAAIAGLCHFRRPDVSVQGEEVTVYTPEER
DPVPLSIHHMPICVSFAFFQQGIYLLVDPNEREERVMDGLLVIAMNKHREICTIQSSGGI
MLLKEQVLRCSKVAGVKVGEITELIQKALENDKKARKEGGKFGFAESLPDKRITALKMEK
SSVDTTDVETKAEKIILDADPPCRVISKPVVWTEGTAQIGEGQGNTWGQIDESEDDEDDE
DSAPESPVVEIQSKKTSLNDDVVTLSDSEEEDVIILQPEKPSQIRVTEQQACSASDISSA
KKKKKNKSAQK
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgaaggagacgccgctgtccaactgtgagaggaactttcttcttcaggcaattactgag
aaaaagcgtcttgatggcaggcagacctatgattacaggaatattaaaattgcttttgga
acagactatggctgttgtattgtggagcttggaaagaccagggtactttgccaggtctcc
tgtgaaatcgttacccccaagatgagccgtcctactgagggaatacttttcttcaatctt
gagatttccccaatggcatttccaggttttgaaatggggaggcaatcagaattgtctgta
aaattaaatagattgttggagagatgtttgcggaactccaagtgcatagacacagaatct
ctctgtgttgctgctggcgagaaggtatggcagatacgtgttgatctgcacttgttaaac
catgaaggaaacatcattgatgcagcaagcattgcagctattgcaggattgtgtcatttc
aggaggcccgatgtgtctgtccaaggggaagaggtcactgtgtacactccagaagaacgt
gatcctgtgcctctcagcatccatcacatgccaatttgtgtcagctttgccttttttcag
caaggaatatacttgttagtagatcccaatgaacgcgaggagcgggttatggacggctta
ctggtgattgcaatgaacaaacaccgtgaaatctgtacaattcagtccagtggtgggatt
atgctgcttaaagaacaggttctgaggtgcagcaaggtagcaggtgtgaaggtgggagaa
ataacagagctcattcaaaaggccctggaaaacgataaaaaggccaggaaagaaggaggc
aagtttggatttgcagaatctctaccggataaaagaataaccgctctaaaaatggaaaaa
tcttccgttgatacaacagatgtggaaaccaaggccgagaagataatattggatgctgat
cctccatgtagagtcatttctaaaccagtagtatggactgaaggaacagcccagattggg
gagggtcagggaaacacatggggccaaattgacgaatcagaagatgatgaggatgatgaa
gactctgcccctgaaagcccagtggttgagattcaatcaaagaaaacaagtttaaatgat
gatgttgtgacactgtcggatagtgaagaagaagatgtaataattctacagcctgagaaa
ccatcacaaataagagtcacggaacaacaagcatgttcagcaagtgatatatccagtgcg
aagaagaagaaaaagaataaatctgcacaaaagtga

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