Xenopus laevis (African clawed frog): 443889
Help
Entry
443889 CDS
T01010
Symbol
smyd1.L, smyd1
Name
(RefSeq) SET and MYND domain containing 1 L homeolog
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00310
Lysine degradation
xla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
443889 (smyd1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
443889 (smyd1.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
443889 (smyd1.L)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
443889 (smyd1.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
443889 (smyd1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
DUF3369
Motif
Other DBs
NCBI-GeneID:
443889
NCBI-ProteinID:
NP_001085463
Xenbase:
XB-GENE-6251721
UniProt:
Q6GQE2
LinkDB
All DBs
Position
1L:18098745..18127832
Genome browser
AA seq
478 aa
AA seq
DB search
MENVEIFDSEGKGRGLRATRESWAGDVIFAEPAYSAVVFDNLSHCVCHSCFKRQEKLLRC
GQCKFAHYCDRTCQKESWVNHKHECLAIKKAGKAPNENIRLAARILWRIEREGGGLTEGC
LVSIDDLQNHLDKFGDGEKSSLMEDVQKFMDFWPSQSQQFGMQYISHIFSVISCNGFTLS
DQRGLQAVGVAIFPNLCLTNHDCWPNCTVIFNNGKIELRALGKINKGDELTVSYVDFLNL
TEDRMEQLKKQYYFDCTCEHCTNKTKDALLLAVNDGESKPEDRVVKEVIQYSKDTMEKIE
KARSEGSYHQVVKLCRECLKRQEPIFADTNIYMLRILSIYSEVLSYLQMFQDAAENAKKM
IDGYMKIYHPNNAQLGMAIMRAGVTQWHAGMIEVGHGMICKAFAILLITHGPSHPITKDL
EMMRSQTEMELRMFKENEFVYYKMREAALSNKPFQVMDEPNIEAPTNLFHKKPQEAKS
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgtagaaatttttgattcagagggcaaaggacgaggcctaagggccactaga
gagtcctgggctggagatgttatatttgcagaacctgcttattctgcagttgtgtttgac
aatctctcccactgtgtgtgccattcatgcttcaagaggcaggagaaactactgcgctgt
ggacagtgtaaatttgctcactactgtgaccgaacgtgtcaaaaggagtcatgggttaac
cacaaacatgagtgtttggccattaagaaagctggtaaagcaccaaatgaaaatatcagg
ctcgctgcacgaattctctggaggatagagagggaaggaggtggcctcaccgagggatgc
ttagtctccattgatgatctacagaatcatttagacaaatttggtgacggagagaagagt
tcactcatggaagatgttcagaaatttatggatttttggccaagtcagagccaacagttt
ggcatgcagtacatctctcatatctttagcgtgataagctgcaatggttttactctgagt
gaccaaaggggtctccaagctgttggtgttgcgattttccctaacctctgccttactaac
catgactgttggccaaattgcaccgtcatattcaacaatggcaaaattgagcttcgagct
ctcgggaagatcaacaaaggagatgagcttactgtgtcctatgtggatttcctcaatctc
actgaggatagaatggagcaactgaagaagcagtattactttgactgcacgtgtgagcat
tgcaccaacaaaaccaaggatgcattgctcttggctgtgaacgatggagaaagcaagcca
gaagatcgtgttgtgaaagaggtgatccaatattcaaaagacaccatggagaagatagaa
aaagctcgttcagaagggtcgtaccatcaggtggtgaaactctgccgggaatgtctgaag
agacaggagcccatttttgccgataccaacatctacatgttacggatcctaagcatatat
tcagaagtgctctcttatctccaaatgtttcaggatgccgcagaaaatgccaagaaaatg
attgatggatacatgaaaatctatcatccaaataatgcccagctgggaatggctataatg
agggcaggagtgacccaatggcatgctggcatgattgaagttggtcacgggatgatctgc
aaagcctttgcaattcttcttatcacacacggcccttcacatcctatcacaaaagactta
gagatgatgcgctcgcagacagaaatggagcttcggatgttcaaggagaatgagtttgtt
tattataagatgagggaagcagctctatcaaataagcccttccaagtcatggatgaaccc
aacattgaagcccccacaaacttattccacaaaaagccgcaagaagcaaaatcctaa
DBGET
integrated database retrieval system
