Xenopus laevis (African clawed frog): 443892
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Entry
443892 CDS
T01010
Symbol
trmt6.S
Name
(RefSeq) tRNA methyltransferase 6 S homeolog
KO
K03256
tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xla03016
]
443892 (trmt6.S)
Transfer RNA biogenesis [BR:
xla03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
443892 (trmt6.S)
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Gene cluster
GFIT
Motif
Pfam:
Gcd10p
RNA_pol_Rpb1_2
Motif
Other DBs
NCBI-GeneID:
443892
NCBI-ProteinID:
NP_001085466
Xenbase:
XB-GENE-17342168
UniProt:
Q6GQD8
A0A974CS91
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Position
5S:complement(25945434..25967997)
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AA seq
479 aa
AA seq
DB search
MDQSDSGSGRFIGDGDFVVLKRQDVFKAVQVQRRKKIIFEKQWIYLDNVIGKHYGTTFEI
GQGGNLQTKRTEVTTTELKEAGSDNRNIVDDGKSQKLTRDDIEALKEKGITGEAIVQQLI
ENSATFRDKTEFAQEKYIKKKKKKYEAVITVLKPSTRILAMMYCAREPGKICQLRYDTLA
QMLTMGNIHAGSKVIVMETCAGLVLGAVMERMGGLGSVIQMYPGGGPVRAATDSFGFPKS
FYKGLYEFPLSKVESLHTGTYSCRSSSSEQNPALGNNESSETQDQRRDNGEDSNSATECE
TVMDTNAQGQQEASGEGPLSQEEAQKQEKKQLALEKKRKQDEKRRKESEAATLLQEKNAD
GLIVASRFHPTPLMLSLLEFVAPSRPFVIYCQYQEPLLECYTKLREKGGVVNLKLSETWL
RSYQVLPDRSHPKLVMSGGGGYILHGTTVAAEPAKPNPRTQEKSEEPATKKIKVEELES
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggatcagagtgacagcggctccggcaggttcatcggcgacggtgacttcgtggtgctg
aagaggcaggacgtgttcaaagccgtgcaggtgcagaggcggaaaaaaattatatttgaa
aagcagtggatctatttggacaatgtcattggcaaacattacggaaccacatttgagatc
ggccaaggaggaaatcttcaaacaaagaggacagaagtgaccacaacagagctgaaagaa
gcggggtctgacaaccgcaacatagtggatgatgggaaatctcagaagctcactagagac
gacatagaagcgttaaaggaaaagggcattacaggggaggcaatcgttcagcagctcatt
gagaacagtgcaacatttcgagacaagaccgaattcgcccaagagaagtatataaagaaa
aaaaagaaaaaatacgaggcagtgatcacagtcttaaagccctctacgcgcattctagca
atgatgtactgtgcaagggagcctggcaaaatttgccagctgcgctatgataccctggca
cagatgctcaccatgggtaatattcacgccggcagtaaagtcattgtcatggagacgtgt
gccggtttggtcctgggagctgtaatggagcgcatgggaggattgggctcagttatacag
atgtacccaggcgggggccccgtcagagcagcaactgattcttttggatttccaaagtcc
ttctataaaggtttatatgagtttccactgagcaaagtggagagcctccacaccgggacc
tactcctgtcgtagcagctcctcggaacagaacccggcactggggaacaatgagagcagt
gaaacccaggaccagagacgagacaacggggaggactccaactctgccaccgaatgtgaa
actgtcatggacactaatgcacagggacaacaggaggccagtggcgagggaccattaagc
caagaggaagcccagaaacaggaaaagaaacagctggctctggaaaaaaagcggaaacaa
gatgaaaaaaggagaaaagaatccgaagcagccactttgttgcaagaaaaaaacgcagat
ggattaatcgtagcctcccgattccatcccactcctctgatgctctccttgctggaattt
gttgctccttccaggcctttcgtaatatattgccagtaccaggagcctctactggaatgt
tacaccaagttgagagaaaaggggggtgtcgttaatctgaaactgtctgagacctggctg
cgcagttaccaggttttgccagaccgaagtcaccctaaactggtgatgagcggaggagga
gggtacatacttcatggaaccacagtggcagcagaacctgcaaaaccaaatccccgcact
caagagaagagtgaagaacctgcaaccaaaaaaattaaagttgaggaattagagagctaa
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