Xenopus laevis (African clawed frog): 443909
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Entry
443909 CDS
T01010
Symbol
g3bp1.S
Name
(RefSeq) ras GTPase-activating protein-binding protein 1 isoform X1
KO
K17265
Ras GTPase-activating protein-binding protein 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
443909 (g3bp1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
443909 (g3bp1.S)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xla04147
]
443909 (g3bp1.S)
Enzymes [BR:
xla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
443909 (g3bp1.S)
5.6.2.5 RNA 5'-3' helicase
443909 (g3bp1.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
443909 (g3bp1.S)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
443909 (g3bp1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
RRM_7
NXF_NTF2
Motif
Other DBs
NCBI-GeneID:
443909
NCBI-ProteinID:
XP_018109732
Xenbase:
XB-GENE-17333098
UniProt:
A0A8J0UMJ8
LinkDB
All DBs
Position
3S:11641004..11667400
Genome browser
AA seq
503 aa
AA seq
DB search
MMLLPSSGPHGPNEEGTVLSIGETGRKFQLTKEMVMEKPSPLLVGREFVRQYYTLLNQAP
DFLHRFYGKSSSYVHGGLDSNGKPVEAVYGQTDIHKKVMSLNFKDCRTKIRHVDAHATLN
DGVVVQVMGELSNNRQPMRRFMQTFVLAPEGSVANKFYVHNDIFRYQDEIFGDSDTEPPE
ESDEEVEEPEERQQSPEVVAADEATYYEQPGSNDLDEPLEEQIVEPELEPEPEQEPEPEI
VEEKCEPASEEPAPEEEEEETVTIEKSPSPLPADPAPVVQEDPRTFSWASVTSKNLPPSG
AVPVSGIPPHVVKVQTSQPRTDTKSEAQTTAQRPPQRDQRVREQRTTVPPPRGPRPLREG
EPESEIRRINRYPDSHQLFVGNLPHDVDKTELKEFFQTYGNVVELRINSGGKLPNFGFVI
FDDAEPVQKILGNRPIMFRADVRLNVEEKKTRAAREGDRRGDRPRGIGGPRGGLGGGLRG
PPRGAMSQKPGFGAGRGIQGPRQ
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgctgccatcttctggtccgcatggcccaaatgaggaaggaacagtcctcagc
ataggagagaccggcagaaaatttcagttgaccaaagaaatggtgatggagaagccaagt
cccctgctagtcgggcgggaatttgttaggcagtattatactctgctcaaccaggcacca
gactttctccacaggttctatgggaaaagttcttcctatgttcatggtggtctcgacagc
aacgggaaacctgtggaggctgtctatgggcagacggacatccacaagaaagtaatgtct
ttgaatttcaaggattgccgcacaaagatccgccatgttgatgcgcatgccactcttaat
gatggggtagtggtgcaagtcatgggagaactgtcaaacaacaggcagccaatgcgtcgg
ttcatgcagacctttgtgttggcacctgagggctctgtggcaaacaagttttatgttcac
aatgacatatttcgctatcaagatgaaatttttggtgattcagacacagagcctccagaa
gaatctgatgaagaggtagaagagccagaagagaggcagcaaagcccagaggtggtagct
gctgatgaagctacatactatgaacagccaggaagcaatgatttggatgaaccgctggag
gagcagatagttgaaccagaactggagcctgaacctgaacaagagccagagccagaaata
gtggaagagaaatgtgaaccagcatcagaggaacctgctccagaagaggaggaggaagaa
acagtgactatagaaaaaagcccatcccctctcccagcagatcctgctccagtcgtgcaa
gaggacccaaggacattctcatgggcatcagtaaccagcaaaaaccttcctcctagtgga
gcagttcctgtgtctggtatcccaccacatgttgttaaagttcagacatcccagccacgg
acggacaccaaatctgaagcccagacaacagcacagaggccaccacaacgagatcagaga
gtaagagaacaaagaactacagtaccacctccgagaggacccaggcctttacgagaagga
gaaccagagtcagaaataaggcgtatcaataggtatccagacagccatcaactatttgtt
ggcaacctgcctcatgatgtagataaaactgaactgaaagagttctttcagacttatggg
aatgttgtcgaacttcgtataaacagtggaggcaagcttcctaactttggttttgtgata
tttgatgatgctgagccagttcagaagatcctaggaaatcggcctataatgttcagagca
gatgtacgtttgaatgttgaagagaagaaaacgagggcagcaagagagggtgatcgtcgt
ggtgacagaccccgtggcataggaggaccacgtggtggtcttgggggaggtctgagagga
ccacctcgtggtgcaatgtctcagaagcctggctttggggctggaaggggtattcaaggc
ccacgccagtga
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