Xenopus laevis (African clawed frog): 444116
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Entry
444116 CDS
T01010
Symbol
rbm4b.S, rbm30, rbm4l, zcchc15, zcrb3b
Name
(RefSeq) RNA binding motif protein 4B S homeolog
KO
K13187
RNA-binding protein 4
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
444116 (rbm4b.S)
Spliceosome [BR:
xla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
444116 (rbm4b.S)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
zf-CCHC
RRM_7
zf-CCHC_3
RRM_occluded
zf-CCHC_5
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
444116
NCBI-ProteinID:
NP_001085690
Xenbase:
XB-GENE-17334929
UniProt:
Q6GPD7
A0A974HKS8
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All DBs
Position
4S:1153165..1161359
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AA seq
336 aa
AA seq
DB search
MVKLFVGNLPPEATQPELKSLFEQFGRVTECDIIKNYGFVHMDDRKAADEAVHNLNQYKL
HNVAINVEHSRGKPKASTKLHVSNLSSSCTSDELRAKFEEYGAVLECDIVKDYAFVHMER
SAEALDAIKNLENTEFKGKRMHVQLSTSRLRVTPGMGDRTLCYRCGKDGHWSKECPLDQM
AKEQASGYPPESFPDPYGPMRSAAGPYRTAYAERVFYDDRERFSIIDYYQRYRVRPSSYD
TILERRLTGLPPAAATVSYRERIESFPYERHLLPPPPQLPSSYYARERSPIRRSSSASSS
MEIYRTERRLSPIMRNPFADDPRCPRDSYYDRVQYL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagttatttgtgggaaatctgcctcccgaggccactcagccagagctgaagtcg
ttgtttgagcagtttggtcgtgtgaccgagtgcgatatcattaaaaattatggctttgtc
catatggacgacagaaaggcggcagatgaagccgtacataatttaaaccagtacaagctg
cataacgttgctatcaatgtggaacacagtcgtggaaagcctaaggcctccactaagctc
catgtcagcaacctcagcagtagctgcaccagcgacgaactgcgcgccaaatttgaagaa
tacggggcagtcctagagtgtgatattgtcaaggactacgccttcgtccacatggagagg
tcggctgaagcactggatgccatcaagaatctggagaacactgaattcaaaggcaaacgg
atgcacgtacagctctcaacaagccgcctgcgagtcaccccgggaatgggagacaggact
ctgtgctatcgttgcgggaaggacggccactggtccaaagagtgccctctagatcaaatg
gccaaggagcaggcgtcgggctacccccctgaatcatttccagacccttatggccccatg
cgcagtgcagctggtccttacagaacggcctatgctgaacgtgttttctacgacgatcga
gaacgatttagcatcattgactactaccaacgctaccgcgtgcgtccctcctcttatgat
acgatactcgagagacggctgactggcctgccccctgcagccgccacagtttcatacagg
gaacgcattgaatctttcccatacgagaggcatttactacccccaccaccccaacttccc
agctcctattacgctcgggagcgtagccctatacgacgctcctcttctgcttcctccagc
atggaaatatacagaacggagcggcgcctctcccccattatgcggaatcccttcgctgac
gatcctcgatgcccccgggattcctactatgatcgggtgcaatatttgtaa
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