Xenopus laevis (African clawed frog): 444125
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Entry
444125 CDS
T01010
Symbol
top3a.L, top3a, xtop3a
Name
(RefSeq) DNA topoisomerase III alpha L homeolog
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03440
Homologous recombination
xla03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
444125 (top3a.L)
03460 Fanconi anemia pathway
444125 (top3a.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xla03032
]
444125 (top3a.L)
03400 DNA repair and recombination proteins [BR:
xla03400
]
444125 (top3a.L)
Enzymes [BR:
xla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
444125 (top3a.L)
DNA replication proteins [BR:
xla03032
]
Eukaryotic type
DNA Topoisomerases
444125 (top3a.L)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
444125 (top3a.L)
FA (Fanconi anemia) pathway
444125 (top3a.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
444125
NCBI-ProteinID:
NP_001085699
Xenbase:
XB-GENE-1003603
UniProt:
Q6GPC0
LinkDB
All DBs
Position
9_10L:complement(121952513..121977417)
Genome browser
AA seq
1022 aa
AA seq
DB search
MVILSRVLALSKFKVVLRPAVRFCSHRTAAEMALRIPVQKVLCVAEKNDAAKGIADLMSN
SRMRRREGFSKFNKIYEYEYHLFGKDVTVVMTSVSGHLLALEFMDHMKKWHSCNPVSLFE
AEVQKYCPDDFVNIKRTLEREVRQCQALIIWTDCDREGENIGFEIIHVCKSVKPNLQVFR
ARFSEITPRSIRMACEHLVQPDQNINDAVDVRTELDLRIGAAFTRFQTLRLQKIFPSVLS
NQLISYGSCQFPTLGFVVERFKAIQAFIPETFYKIKVTHEHEDGLVEFSWKRNRLFNHTA
CLVLYQICMEDPMATVMEVGSKPKSKWRPVALDTVELEKLASRKLKIGAKETMKTAEKLY
TQGFISYPRTETNIFPKDLNLTSLVEQQTHDPQWGGFAQRILERGGPTPRNGNKTDQAHP
PIHPTKYTNNLQGNEQRIYEFIVRHFLACCSQDAQGQETTVEIDIAAERFVAHGLMIIAR
NYLDVYPYDKWNTKIIPVYEMGAQFQPTTVEMVDGETSPPQLLTEADLIALMEKHGIGTD
ATHAEHIETIKSRSYVGLTPEQRFLPGELGMGLVEGYDSMGFQMSKPDLRAELESDLKLI
CEGKKDKFTVLRLQIQKYKQVFVEAAAKATKLDEALSQYFGQAAEAVPQQEIYAETPLPV
RKCPQCNRDMVLKTKRDGGFFLSCVGYPSCKSSVWFPSSVLEVSRDESICSTCRPHPVHK
LKLKFKRGSIPPLMPLEFVGCIGGCDETLREILDLKYLHGGNRPPQAAPRESNHLQVNQT
SNRMGNSGDGRGRQPQTKTLKPPVVKPSTSRGAPPIPGNSESNEVVCNCGVAAVQLTVRK
EGPNQGRPFYKCNGGACNFFLWADQEDGGGQNAPAGPSTGRPSNAFNNSRAPDSFRSGGG
SNDPGSEGQAVVCMCNQPAVTRTVQKDGANKGRQFHTCSKPREQQCGYFQWADENVPPGS
SSGFSGSSGGSSFSGGSGAQRNSGKKNKRSENSFSGPTAKKPRSCGICHQPGHNRTNCPQ
NR
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggttatcctgagcagggtcctagccctcagcaagtttaaagttgtgcttcgtcccgca
gttcgtttctgctctcaccgtacggcagcggaaatggctttgaggatcccggttcagaaa
gttctttgtgtagcagagaagaacgatgctgccaaagggattgcagatctcatgtccaat
agcaggatgagaaggagggaaggtttctccaagtttaacaagatttatgaatatgaatat
catttgtttggaaaggacgtgactgtggtgatgacttctgtatcaggacatctgttagcc
ctcgagttcatggaccatatgaaaaaatggcacagctgcaacccggtgtctctgtttgag
gcagaagtacagaagtactgtcctgatgactttgtaaacatcaagcggaccctggagcgg
gaggtgcgacaatgtcaggctctcataatatggacggattgtgacagagagggagaaaac
attggctttgagatcatccatgtctgcaaatcagtcaagccaaacttgcaggttttccgg
gcccgcttctctgagatcactcctcgttccatccggatggcttgtgaacacctggtacaa
cctgaccagaacatcaacgacgctgtcgatgtacgaacggagcttgacctgcggattggt
gctgctttcacacggttccaaaccctccgacttcagaagatatttccttctgtgctgtcc
aatcagctcatcagctatggcagctgtcagttcccaaccttgggctttgtggtggagagg
tttaaagccatccaggcttttattcctgaaaccttctacaagatcaaagtgacacatgaa
cacgaagatggactggtggagtttagctggaagcggaaccgtctctttaaccacacggct
tgtctggttctctatcagatctgtatggaggaccctatggctacggtgatggaggtggga
agcaaaccaaagagcaagtggagacctgtggctctagacaccgtggagctggaaaagctg
gcgtcccgcaagctgaaaattggagccaaggaaaccatgaaaactgcggagaagctttat
actcaaggtttcatcagttatccacgtacagaaacaaacattttccccaaggatcttaac
ctgacatctttggttgagcagcagacacacgatccccagtggggtgggtttgcacagcga
atcttggagaggggtgggccgaccccacggaacgggaacaagacagatcaggctcaccct
cccatccatcccactaaatacaccaacaatctgcagggaaatgagcagcggatctacgag
tttatcgtgcgccacttcttggcatgttgctcccaagatgcacagggtcaagagaccacg
gtggaaatcgacattgctgctgagagatttgtggctcacgggttgatgatcatcgctagg
aactatctggacgtctacccttatgacaagtggaatacaaagattatccctgtgtatgag
atgggcgcccagttccagccaaccacagtggagatggtggatggggagaccagcccccca
cagcttctaacagaagccgatctcattgccctgatggaaaagcatgggattggtactgat
gcgacacacgctgagcacattgagaccatcaagtctcgctcgtatgtgggtctcactcca
gagcagaggtttcttcctggagagcttggaatggggcttgtggaaggatatgactctatg
ggcttccagatgtccaaaccagacttacgagctgagctggagtctgacctgaagttgatc
tgtgaagggaagaaggataaattcacagtcctgaggttgcagatacagaagtacaagcag
gtctttgttgaagcagcggccaaagccaccaagttagatgaggccttgtctcagtatttt
ggccaagcagcagaggccgtgccacaacaagaaatctatgcggaaactccccttcctgta
cggaaatgccctcagtgcaaccgggacatggtgctgaagaccaagagggatggagggttc
ttcctttcctgtgtggggtatcccagctgtaaatcatccgtctggttccccagctctgtc
ttggaagtgtcaagagatgaaagtatctgcagcacttgcagaccccacccagtgcacaag
ctaaagttgaagtttaagcggggaagtatcccacctctcatgcccttggaatttgttggc
tgcattggaggttgcgacgaaacacttcgggagatcctggacctgaaatatctgcacgga
ggtaacaggcccccccaggcagccccacgcgagagcaaccacttgcaggtgaaccagaca
agtaatcgcatgggaaacagcggggatgggcgagggcgccagccacagactaaaactctg
aagcctcctgtggtgaaaccttcgacttccagaggagctccgcccatccccggcaacagt
gagagcaatgaagtggtttgtaactgtggagtagcagcagtgcagctcactgtccgcaag
gaaggacccaaccaaggccgacccttctacaagtgcaacggcggagcctgcaactttttc
ctgtgggcagatcaggaggatggaggtggtcagaatgctccagctgggccctctacagga
cgtccttccaatgccttcaacaactctagggcacctgatagttttaggtctggaggagga
agcaacgacccaggatctgaagggcaggcagtagtgtgtatgtgcaaccaaccagctgtc
acacgtactgtgcagaaagacggagccaacaaaggacgacagtttcatacctgctccaaa
cccagagagcagcagtgcggctacttccagtgggcagatgagaatgttcctccaggctct
tccagcggattttccggatcctccggtggaagttcattcagcggcggatctggggcccaa
cgcaactctggcaagaaaaataaaagatctgagaacagtttttcgggcccaacagcaaag
aagccgagatcttgtgggatctgccaccagcctggacacaacagaaccaactgcccacag
aacagatga
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integrated database retrieval system
