Xenopus laevis (African clawed frog): 444232
Help
Entry
444232 CDS
T01010
Symbol
mib1.L, dip-1, mib, mib1, mindbomb
Name
(RefSeq) E3 ubiquitin-protein ligase mib1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
444232 (mib1.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
444232 (mib1.L)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
444232 (mib1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
SH3_15
MIB_HERC2
Ank_4
Ank_3
zf-C3HC4_3
ZZ
Ank_KRIT1
zf-C3HC4_2
Sina_RING
Prok-RING_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
444232
NCBI-ProteinID:
NP_001085805
Xenbase:
XB-GENE-1001398
UniProt:
Q6GNY1
A0A974HG48
LinkDB
All DBs
Position
6L:115561161..115613298
Genome browser
AA seq
1011 aa
AA seq
DB search
MSGSRNNRVMVEGVGARVARGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANY
RCSGAYDLRIMDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTVCYHGDKHHL
RHRFYRITTPGSERVLLESRRKSKKITARGIFAGARVVRGVDWQWEDQDGGNGRRGKVTE
IQDWSASSPHSAAYVLWDNGAKNLYRVGFEGMSDLKCVQDAKGGSFYRDHCPVLGEQNGN
RNPGGLLIGDLVNIDLELEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPS
GNRWTFNPAVLTKANVVRSGDAAQGAEGGTSPFQVGDLVQICYDIERIKLLQRGHGEWAE
AMLPTLGKVGRVQQIYSDNDLKVEVCGTSWTYNPAAVSRVASVGSAISNATGERLSQLLK
KLFETQESGDLNEELVKAAANGDVAKVDDLLKRQDVDVNGQCAGHTAMQAASQNGHVDIL
KLLLKHSVDVEAEDKDGDRAVHHAAFGDEGTVIEVLQRGGADLNARNKRRQTPLHIAVNK
GHLQVVKKLLDFSCHPSLQDSEGDTPLHDAISKKRDDILAVLLEAGADVTITNNNGFNAL
HHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGSANLD
IQNVNQQTALHLAVERQHTQIVRLLVRAEAKLDIQDKDGDTPLHEALRHHTLSQLRQLQD
MQDVGKVDTTTWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLAVRNKKGQSPLDL
CPDPNLCKTLAKCHKEKSSGQVGSHSPSMINNDSETLEECMVCSDLKRDTLFGPCGHIAT
CSLCSPRVKKCLLCKEQVQSRTKIEECVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQ
CRAVVERRVPFVMCCSGKGTEDVADDIAGGNIPALQKDKDNTNVNADVQKLQQQLQDIKE
QTMCPVCLDRLKNMIFMCGHGTCQLCGDRMSECPICRKAIERRILLYSMSC
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgagcggctcccggaataaccgagtgatggtggagggggtgggggctcgggttgcgcgg
ggcccggattggaaatgggggaaacaggacggaggagagggtcatgtgggcacagtacga
agcttcgaaagccccgaagaggtggtggtggtctgggacaatggcaccgctgccaattac
cgctgctccggggcctatgacctgaggataatggacagtgcgcctactggcattaaacat
gatgggacgatgtgcgatacatgccgccagcaacccattattggaatccgttggaaatgt
gccgaatgtaccaactatgatctgtgcactgtgtgctaccatggggataagcaccacctt
agacatcgcttttacaggatcacaacacccggaagtgagagggtgctcctggagtctcga
cgcaagtcaaagaagataaccgcaagaggtatctttgcaggagctagagtagtgcggggt
gtagattggcagtgggaagaccaagatggtggtaatggaaggagaggcaaagtaaccgaa
attcaagattggagtgcatcaagcccacacagtgcagcatatgtgttgtgggacaatgga
gcaaaaaatctgtatagggttggatttgaaggcatgtctgacctgaaatgtgtccaggat
gctaaaggtggttctttttacagagatcattgtcctgtgttaggtgaacagaatggtaat
cggaatccaggtggcctgctcatcggtgatctagttaatattgatttagagttggaaatt
gttcagtcattgcagcatggtcatggaggttggactgacggcatgtttgaaaccctaacc
actaccggtactgtgtgtggcattgatgaagatcatgatattgtagtgcagtaccccagt
ggaaacaggtggacatttaacccagctgttcttacaaaggcaaatgttgttcgaagtggt
gatgctgctcaaggtgcagaaggtggaacatcaccttttcaagtgggtgatcttgtacaa
atatgttatgacattgagagaataaaacttcttcaaagaggccatggtgaatgggctgaa
gctatgctaccgactctaggcaaagttggcagagtacaacagatttattcagacaatgat
ttgaaagttgaagtttgtgggacatcttggacgtataacccagctgctgtttcaagagtt
gcctctgtggggtcagccattagtaatgccactggtgaaagactgtcacaacttttgaag
aaattgtttgagactcaggaatcaggcgacctaaatgaggagctggtgaaagccgccgca
aatggagatgtggccaaagtggatgatttgctgaaaagacaggatgtagatgtaaatgga
cagtgcgctggacacacagcaatgcaagccgcaagccagaatggacatgtagatatcctg
aaattgcttctaaagcacagtgtagatgtagaagcggaggataaagacggagaccgggca
gtgcaccatgcagcttttggagatgaaggcacggttattgaagtgctgcagagaggagga
gcagatttaaatgcacggaacaagcgcagacagacgcctcttcatattgctgttaataaa
ggtcacttgcaagttgtaaaaaaattattggattttagctgtcacccaagtctacaggat
tcagaaggtgatactccactccatgatgctatcagcaaaaaacgtgatgatatattggct
gtgctgttggaggctggagcagatgttaccatcacaaacaacaatggatttaatgctctt
catcatgctgcattgcggggaaatcccagtgctatgcgggtcctgctctccaagttacct
cggccatggatcgtagatgaaaagaaagatgacggatacactgctttgcatcttgctgca
ctgaataatcatgttgaagtagcagagttattagttcatcagggaagcgcaaacctggac
attcagaatgtaaaccagcagactgctcttcacttggctgtggaacgtcagcatacgcag
attgtcagactgttggttcgtgcagaagctaaactagacatccaagataaagatggcgat
acaccattgcacgaagcccttcggcaccatactttgtcacagttgcggcagcttcaagac
atgcaggatgttggcaaggttgatactactacttgggagccttcaaagaacaccttaata
atgggacttggaactcaaggagctgagaagaaaagtgcagcctccattgcctgttttttg
gctgccaatggagctgatcttgcagtacgtaacaaaaaaggacagtcccctcttgacctc
tgtccagatcccaacctttgcaaaactttggctaaatgtcacaaggagaaatccagtggt
caagtaggatcccatagtccatccatgatcaacaatgattctgagacattagaagaatgt
atggtgtgctcagatttaaagagagatactctttttggcccgtgtggacacattgctaca
tgttctttatgttctccacgtgttaagaaatgtctcctatgcaaagaacaagtgcagtca
aggactaagatcgaagaatgtgtagtctgttcggataaaaaggcagcagtgctcttccag
ccttgtggccatatgtgtgcttgtgaaaactgtgcaagtctaatgaagaaatgtgttcag
tgccgtgcagtggttgagcgccgagtgccgtttgttatgtgttgcagtggaaaaggtaca
gaggatgtcgcagatgatatagccggcggtaacataccagctttacagaaggacaaggac
aacaccaatgtcaatgcagatgtgcagaagctgcagcagcagttacaggacattaaagaa
cagacaatgtgccccgtttgtttggatcggttgaagaacatgatcttcatgtgtggacac
ggaacttgccagctttgtggagaccgaatgagcgaatgccccatttgtcggaaggccata
gagcgaagaatattattatacagtatgtcttgttag
DBGET
integrated database retrieval system