KEGG   Xenopus laevis (African clawed frog): 444232
Entry
444232            CDS       T01010                                 
Symbol
mib1.L, dip-1, mib, mib1, mindbomb
Name
(RefSeq) E3 ubiquitin-protein ligase mib1
  KO
K10645  E3 ubiquitin-protein ligase mind-bomb [EC:2.3.2.27]
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xla04121]
    444232 (mib1.L)
Enzymes [BR:xla01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     444232 (mib1.L)
Ubiquitin system [BR:xla04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    444232 (mib1.L)
SSDB
Motif
Pfam: Ank_2 Ank Ank_5 SH3_15 MIB_HERC2 Ank_4 Ank_3 zf-C3HC4_3 ZZ Ank_KRIT1 zf-C3HC4_2 Sina_RING Prok-RING_4 zf-RING_5
Other DBs
NCBI-GeneID: 444232
NCBI-ProteinID: NP_001085805
Xenbase: XB-GENE-1001398
UniProt: Q6GNY1 A0A974HG48
LinkDB
Position
6L:115561161..115613298
AA seq 1011 aa
MSGSRNNRVMVEGVGARVARGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANY
RCSGAYDLRIMDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTVCYHGDKHHL
RHRFYRITTPGSERVLLESRRKSKKITARGIFAGARVVRGVDWQWEDQDGGNGRRGKVTE
IQDWSASSPHSAAYVLWDNGAKNLYRVGFEGMSDLKCVQDAKGGSFYRDHCPVLGEQNGN
RNPGGLLIGDLVNIDLELEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPS
GNRWTFNPAVLTKANVVRSGDAAQGAEGGTSPFQVGDLVQICYDIERIKLLQRGHGEWAE
AMLPTLGKVGRVQQIYSDNDLKVEVCGTSWTYNPAAVSRVASVGSAISNATGERLSQLLK
KLFETQESGDLNEELVKAAANGDVAKVDDLLKRQDVDVNGQCAGHTAMQAASQNGHVDIL
KLLLKHSVDVEAEDKDGDRAVHHAAFGDEGTVIEVLQRGGADLNARNKRRQTPLHIAVNK
GHLQVVKKLLDFSCHPSLQDSEGDTPLHDAISKKRDDILAVLLEAGADVTITNNNGFNAL
HHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGSANLD
IQNVNQQTALHLAVERQHTQIVRLLVRAEAKLDIQDKDGDTPLHEALRHHTLSQLRQLQD
MQDVGKVDTTTWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLAVRNKKGQSPLDL
CPDPNLCKTLAKCHKEKSSGQVGSHSPSMINNDSETLEECMVCSDLKRDTLFGPCGHIAT
CSLCSPRVKKCLLCKEQVQSRTKIEECVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQ
CRAVVERRVPFVMCCSGKGTEDVADDIAGGNIPALQKDKDNTNVNADVQKLQQQLQDIKE
QTMCPVCLDRLKNMIFMCGHGTCQLCGDRMSECPICRKAIERRILLYSMSC
NT seq 3036 nt   +upstreamnt  +downstreamnt
atgagcggctcccggaataaccgagtgatggtggagggggtgggggctcgggttgcgcgg
ggcccggattggaaatgggggaaacaggacggaggagagggtcatgtgggcacagtacga
agcttcgaaagccccgaagaggtggtggtggtctgggacaatggcaccgctgccaattac
cgctgctccggggcctatgacctgaggataatggacagtgcgcctactggcattaaacat
gatgggacgatgtgcgatacatgccgccagcaacccattattggaatccgttggaaatgt
gccgaatgtaccaactatgatctgtgcactgtgtgctaccatggggataagcaccacctt
agacatcgcttttacaggatcacaacacccggaagtgagagggtgctcctggagtctcga
cgcaagtcaaagaagataaccgcaagaggtatctttgcaggagctagagtagtgcggggt
gtagattggcagtgggaagaccaagatggtggtaatggaaggagaggcaaagtaaccgaa
attcaagattggagtgcatcaagcccacacagtgcagcatatgtgttgtgggacaatgga
gcaaaaaatctgtatagggttggatttgaaggcatgtctgacctgaaatgtgtccaggat
gctaaaggtggttctttttacagagatcattgtcctgtgttaggtgaacagaatggtaat
cggaatccaggtggcctgctcatcggtgatctagttaatattgatttagagttggaaatt
gttcagtcattgcagcatggtcatggaggttggactgacggcatgtttgaaaccctaacc
actaccggtactgtgtgtggcattgatgaagatcatgatattgtagtgcagtaccccagt
ggaaacaggtggacatttaacccagctgttcttacaaaggcaaatgttgttcgaagtggt
gatgctgctcaaggtgcagaaggtggaacatcaccttttcaagtgggtgatcttgtacaa
atatgttatgacattgagagaataaaacttcttcaaagaggccatggtgaatgggctgaa
gctatgctaccgactctaggcaaagttggcagagtacaacagatttattcagacaatgat
ttgaaagttgaagtttgtgggacatcttggacgtataacccagctgctgtttcaagagtt
gcctctgtggggtcagccattagtaatgccactggtgaaagactgtcacaacttttgaag
aaattgtttgagactcaggaatcaggcgacctaaatgaggagctggtgaaagccgccgca
aatggagatgtggccaaagtggatgatttgctgaaaagacaggatgtagatgtaaatgga
cagtgcgctggacacacagcaatgcaagccgcaagccagaatggacatgtagatatcctg
aaattgcttctaaagcacagtgtagatgtagaagcggaggataaagacggagaccgggca
gtgcaccatgcagcttttggagatgaaggcacggttattgaagtgctgcagagaggagga
gcagatttaaatgcacggaacaagcgcagacagacgcctcttcatattgctgttaataaa
ggtcacttgcaagttgtaaaaaaattattggattttagctgtcacccaagtctacaggat
tcagaaggtgatactccactccatgatgctatcagcaaaaaacgtgatgatatattggct
gtgctgttggaggctggagcagatgttaccatcacaaacaacaatggatttaatgctctt
catcatgctgcattgcggggaaatcccagtgctatgcgggtcctgctctccaagttacct
cggccatggatcgtagatgaaaagaaagatgacggatacactgctttgcatcttgctgca
ctgaataatcatgttgaagtagcagagttattagttcatcagggaagcgcaaacctggac
attcagaatgtaaaccagcagactgctcttcacttggctgtggaacgtcagcatacgcag
attgtcagactgttggttcgtgcagaagctaaactagacatccaagataaagatggcgat
acaccattgcacgaagcccttcggcaccatactttgtcacagttgcggcagcttcaagac
atgcaggatgttggcaaggttgatactactacttgggagccttcaaagaacaccttaata
atgggacttggaactcaaggagctgagaagaaaagtgcagcctccattgcctgttttttg
gctgccaatggagctgatcttgcagtacgtaacaaaaaaggacagtcccctcttgacctc
tgtccagatcccaacctttgcaaaactttggctaaatgtcacaaggagaaatccagtggt
caagtaggatcccatagtccatccatgatcaacaatgattctgagacattagaagaatgt
atggtgtgctcagatttaaagagagatactctttttggcccgtgtggacacattgctaca
tgttctttatgttctccacgtgttaagaaatgtctcctatgcaaagaacaagtgcagtca
aggactaagatcgaagaatgtgtagtctgttcggataaaaaggcagcagtgctcttccag
ccttgtggccatatgtgtgcttgtgaaaactgtgcaagtctaatgaagaaatgtgttcag
tgccgtgcagtggttgagcgccgagtgccgtttgttatgtgttgcagtggaaaaggtaca
gaggatgtcgcagatgatatagccggcggtaacataccagctttacagaaggacaaggac
aacaccaatgtcaatgcagatgtgcagaagctgcagcagcagttacaggacattaaagaa
cagacaatgtgccccgtttgtttggatcggttgaagaacatgatcttcatgtgtggacac
ggaacttgccagctttgtggagaccgaatgagcgaatgccccatttgtcggaaggccata
gagcgaagaatattattatacagtatgtcttgttag

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