KEGG   Xenopus laevis (African clawed frog): 444264
Entry
444264            CDS       T01010                                 
Symbol
arpc1b.S, arc41, arpc1b-a, arpc1b-b, p40-arc, p41-arc
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B-B
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04144  Endocytosis
xla04517  IgSF CAM signaling
xla04530  Tight junction
xla04810  Regulation of actin cytoskeleton
xla05100  Bacterial invasion of epithelial cells
xla05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:xla00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    444264 (arpc1b.S)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    444264 (arpc1b.S)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    444264 (arpc1b.S)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    444264 (arpc1b.S)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    444264 (arpc1b.S)
   05100 Bacterial invasion of epithelial cells
    444264 (arpc1b.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xla04131]
    444264 (arpc1b.S)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xla04812]
    444264 (arpc1b.S)
Membrane trafficking [BR:xla04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    444264 (arpc1b.S)
Cytoskeleton proteins [BR:xla04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     444264 (arpc1b.S)
SSDB
Motif
Pfam: Beta-prop_EML_2 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40 WD40_WDHD1_1st Beta-prop_WDR5 WD40_Prp19 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WDR55 Beta-prop_WDR35_TULP_N Beta-prop_Aladin Beta-prop_WDR19_1st Beta-prop_HPS5 WD40_Gbeta Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_EIPR1 eIF2A EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st PEP5_VPS11_N Beta-prop_IFT122_1st Rax2 WDR90_beta-prop_4th Beta-prop_SPT8
Other DBs
NCBI-GeneID: 444264
NCBI-ProteinID: NP_001085837
Xenbase: XB-GENE-6255689
UniProt: Q6GNU1
LinkDB
Position
9_10S:complement(83290899..>83307622)
AA seq 369 aa
MAFHSFLLEPITCHAWNKDATQIAFCPNSHDVHIYKKDGVKWTKIHELKEHNGQVTGIDW
APESNRIVTCGTDRNAYVWTLRNNVWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLI
SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSSDFKSRIFSSYIKEVEERP
APTPWGSKMPFGELMFESSSSCGWVHSVCFSNSGDRMAWVSHDSTICIADATKKMRVTSL
ITDTLPLLCVTFITENSLVAAGHDCYPVLYTYDEAQGTLSFGGKLDVPKQSSQRGMTARE
RFQNLDKKASSDTNNITLDSLHKNSISQISVLSGGKAKCSKFCTTGLDGGMCIWDVKSLE
SALKDLKIK
NT seq 1110 nt   +upstreamnt  +downstreamnt
atggcattccacagttttcttctggagcccattacctgtcatgcttggaacaaagatgca
acccaaattgccttttgtccaaatagccatgatgttcacatttacaagaaggatggagtt
aaatggaccaaaatccatgaactgaaggaacataatgggcaagtcacaggtattgactgg
gcacctgagagtaaccgcattgtaacctgtggtacggatcgtaatgcctatgtgtggaca
ctaagaaacaatgtgtggaaacctacgctggtcatccttaggattaaccgagctgcgcgt
tgtgtaaagtggtcacctaaggagaacaagtttgcagtgggcagtggatccaggctaatc
tccatctgttattttgagcaggaaaatgactggtgggtgtgcaagcacatcaagaaacca
atacgttcaactgtcctgagtctggattggcatccaaacaatgttcttctggcagctggg
tccagtgattttaagagcaggattttttcatcttatatcaaagaagttgaagagcgccct
gccccaaccccatggggttccaaaatgccttttggggagttgatgtttgagtccagcagc
agctgtgggtgggtgcatagtgtctgcttttcaaatagtggagaccgtatggcttgggtg
agccatgatagcacaatctgcattgctgatgccaccaagaagatgagagtcacctccttg
attacagacactttgccactcttgtgtgtgacgtttatcactgagaacagtctggtggct
gctggtcatgactgctatccagtactgtacacctatgatgaagcgcaggggactctgagt
tttggaggaaaactagatgtccccaagcagagttcccagagagggatgactgcccgagag
agatttcaaaacctggacaagaaggccagctctgataccaacaacataactctggactct
ctgcacaagaacagcatcagtcaaatatctgtgctgagtggtgggaaggcaaagtgctcc
aaattctgtaccacaggcctggatggaggaatgtgcatctgggatgtcaagagcctggaa
tctgcattgaaagatctgaagattaaatga

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