Xenopus laevis (African clawed frog): 444286
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Entry
444286 CDS
T01010
Symbol
copb1.L, copb1
Name
(RefSeq) COPI coat complex subunit beta 1 L homeolog
KO
K17301
coatomer subunit beta
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
444286 (copb1.L)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xla04147
]
444286 (copb1.L)
Membrane trafficking [BR:
xla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
444286 (copb1.L)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
444286 (copb1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
Cnd1
HEAT
HEAT_2
HEAT_EZ
Arm
MMS19_N
CRAL_TRIO_2
Motif
Other DBs
NCBI-GeneID:
444286
NCBI-ProteinID:
NP_001085859
Xenbase:
XB-GENE-975107
UniProt:
Q6GNR5
A0A974HMX9
LinkDB
All DBs
Position
4L:1913953..1932199
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AA seq
960 aa
AA seq
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MTAAENVCYTLINVPMDSEPPSEITLKADLEKGDAKSKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLDHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVRYEAAGTLVTLSSAPTAVKAAAQCYIDLIIKESDNNVKLI
VLDRLVELKDHPSHERVLQDLVMDILRVLSTPDLEVRKKTLQLALELVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDSSEAASADV
LEFVREAVQRFDHLRPLIVEKMLEVFHAIKSVKIYRGALWIMGEYCSTKEDINSVMTEVR
RSLGEVPIVETELKKESGEVKAEEDVSVGPAQKLVTEMGTYVTQSALSSSRPAKKEEESS
TVAPYRPPLRGFLLDGDFYVAASLATTLTKIALRYVALVQEKRKQNSFVAEAMLLMATIL
HLGKSSLPKKPITDDDVDRISLCLKVLSECSPLMNEIFNKECRQSLSHMLSAKLEEEKLS
QKKESEKRNVTVQADDPISFMQLTAKNETASKEDQFQLSLLAAMGTTQRKEAADPLASKL
NKVTQLTGFSDPVYAEAYVHVNQYDIVLDVLVVNQTGDTLQNCTLELATLGDLKLVEKPS
PLTLAPHDFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPA
SCSDTEFRQMWAEFEWENKVTVNTNITDLNEYLQHILKSTNMKCLTPEKALSGYCGFMAA
NLYARSIFGEDALANVSIEKPIHLGPEAPVTGHIRIRAKSQGMALSLGDKINLSQKKSCI
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgactgccgctgagaatgtgtgttacactctcattaacgtcccaatggactcggaacct
ccatctgaaattactctgaaggcagatctggagaaaggagatgcgaagtccaagacggag
gccttgaagaaagtgatcatcatgatcttgaatggagagaagcttccgggccttctgatg
accatcatccgctttgtgttgccgctgcaggatcacaccatcaagaagcttctcttggtc
ttttgggagattgtgcccaaaacaacacccgatgggaaactattgcaggagatgatcctg
gtgtgtgatgcctacagaaaggatctccagcaccccaatgagttcatcaggggatctaca
ctgcgattcttgtgcaaactgaaggaggcagaacttctggagcctctgatgcctgcgatt
cgggcctgcctggaccaccggcacagctatgtgcgtaggaacgcagtgctcgcaatctac
accatctacagaaactttgagcacctgatcccagacgctccagaactgatccatgatttc
ctggtgaatgagaaagatgcgagctgcaagaggaatgccttcatgatgctcatccatgcc
gaccaggaccgggccctggattacctgagcacctgcattgaccaagtgcagacatttggg
gacatcctgcagttggtcatcgttgagctgatatacaaggtgtgccatgctaacccttct
gagagagctcgcttcatccgctgcatctacaaccttctccagtcctccagccccgctgtc
aggtatgaagctgccggaacactggtcaccctctccagcgctccaactgccgtcaaggca
gctgctcagtgctacattgacttgatcatcaaggagagcgacaacaacgtgaagctaatt
gtgttggaccgacttgtggagctaaaggaccatccttcccatgagcgagtgctgcaggat
ctggtcatggacatcctgcgggtgctgagcacccctgatctggaagtgcgcaagaaaacc
ctccagctggctcttgaattggtttcctcacgcaatgtggaagagctggtcatcgtgctg
aagaaggaggtgatcaagaccaataacgtgacggagcacgaggacacggacaagtacagg
caactgctggtgaggactctccactcgtgcagcgtgagattcccagatatggctgccaac
gtcattcccgtgctcatggagttcctcagcgacagcagtgaggcggcgtcggctgatgtc
ctggagttcgtacgcgaggccgtgcagcgattcgatcatctccggccgctgatagtcgag
aagatgctggaggttttccatgccatcaaatcagtcaagatatacaggggggccctgtgg
attatgggtgaatactgcagcactaaagaagatattaacagtgtgatgactgaggtgcgc
aggtcactgggagaggtgccgattgtagagacagaactcaagaaggaatcgggagaagta
aaagcagaggaagatgtgagtgtggggccggcgcagaagctggtgacagaaatgggcact
tacgttacacagagcgccctcagcagctcacggccggccaagaaagaggaggagagttcc
actgttgctccttacagacctcccctcagagggttcctgctggacggcgatttctacgtt
gccgcatctctcgccaccaccctgacaaagattgccctgcgctacgtggctttggtccag
gagaagaggaaacaaaattcatttgtcgcggaagccatgttgctaatggccaccatcctt
cacctgggcaagtcctccctccccaagaagccaatcacagacgacgatgtggatcgcatc
tccctgtgcctcaaggtgctgtcggaatgttctcccctcatgaacgagatcttcaacaag
gaatgtcgccagtccctgtcccacatgttgtcggccaagctggaggaggagaagctctcc
cagaagaaagagtcagagaagaggaacgtgactgttcaagcagacgaccccatatccttc
atgcaactgacggccaagaacgaaacggcctccaaagaggatcagtttcagctcagcctt
ctggccgccatggggacaacgcaaaggaaggaggccgccgaccctctggcctccaaactc
aataaggtgacgcagctgacgggattctcagacccagtgtacgcagaagcttatgtgcat
gtcaatcaatatgatattgtgctggatgtgctggtggtgaatcagaccggcgacaccctg
cagaactgtaccctcgagctggcaaccctaggtgatctgaagctcgtagagaagccctcc
cctctcaccctggccccccacgactttgccaacattaaggctaacgtcaaagtcgcctct
acggagaacggaatcatttttggcaatatcgtgtacgacgtgtcgggcgcagccagcgac
aggaactgtgtcgtcctcagtgatatccacatcgatattatggactacatccagcctgcg
tcctgctccgacacggaattccgacagatgtgggcggagtttgaatgggagaataaggtg
acggttaatacaaacatcacagatctgaatgaatatctgcaacacattctgaaatctaca
aacatgaaatgtctcaccccagagaaggcgctgtctggttactgcggcttcatggcggcc
aatctttacgcccgctccatatttggcgaagacgccctcgccaacgtcagcatcgagaag
cccattcacctcggaccggaagcccccgtaactgggcacataaggattcgagccaagagc
caggggatggcgctgagcctcggggataagatcaacctttcgcagaagaaatcctgtata
taa
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