Xenopus laevis (African clawed frog): 444450
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Entry
444450 CDS
T01010
Symbol
dis3l.L, dis3l
Name
(RefSeq) DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
444450 (dis3l.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
444450 (dis3l.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
444450 (dis3l.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Rrp44_CSD1
Rrp44_S1
OB_HELZ2
OB_RNB
Motif
Other DBs
NCBI-GeneID:
444450
NCBI-ProteinID:
NP_001086021
Xenbase:
XB-GENE-1013183
UniProt:
Q6GN11
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All DBs
Position
3L:123621370..123654062
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AA seq
961 aa
AA seq
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MQTACQAVQHQRGRRQYKKLCSLLRDTRHDCILFSNEFQNHAYLPREMGESALAWQTRCI
YNSCVWYYQHCQKKIPVVMVTEDESVIGKYNTETQEVYVVSFQIYLETFWPNFKGALELY
KSLRDTHLERKLESRESNGKEYPEHLPLEILEAGIKSGRYKQGVLSVNKHRAQLESFVRL
QGLGGKETDIQSDIFIHGTKPRNRAIHGDLVAVELLPKSEWKGRTGALCENETDEKVGDM
QAEVMPTGRVVGIMQRNWRDYVVTFPAKEDTETQGKNTQKVLVMPWDYRIPKIRISTQQA
EALQNYRVVVRIDSWESNSLYPNGHFVRALGRAGNLEAEIATILVENSISLNPFSEAQLA
EMPSNTHENPWQVKPEEGDRLDLRETHLVFSIDPKGCEDVDDALSIRVLPSGDLELGVHI
ADVTHFVQHNTYTDIEARSRATTYYLADRRNDMLPLILSADLCSLLGAVDRYAVSVIWEM
DCSTYEIRRVWYGRTIIRSSYKLSYEVAQQLLDGDLEPLSTEKELHPLKQDPARLQQLLW
AVGKMTEVAHATRMRRNMSGALELEGVEVRVQLGEKHSIDDLVPKQPLQVHETIAECMIL
ANHWVAKKIWESYPQHALLRLHPPPRQEFFQELKECAKARGFSIDTRSNKALADSLDQAH
DPSDPLVNQLLRMMATQAMSNARYFSTGSYTEDEFYHYGLALEKYTHFTSPIRRYADIVV
HRLLLAAVNKGPKDHLLGNKDLEELCRHINARNRAAQQCQKQSTELFQCMFFKDKDPDSD
QRCISDAVIYGIRTNGVLLFIPRYGIKGAAYLKNTDGLVLACEEDGQCRWVHGSLQRLPA
QIVVTTQEAKSFSFCLFDHVTVRIRIQSSRFHPDSIRLEIISNRPNPSQEALPSASNPQL
LRTELVKEVTRTAVEAQLAVEGAAELKPVERYQEYRQTQGQSLYTMLEELWDLALLDVSG
A
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgcagactgcgtgccaggctgtacagcatcaacgtggacgaaggcaatacaagaagttg
tgttctctgcttagagacactcgtcatgactgcatcttgttctccaatgagttccagaac
catgcctatcttcctagagaaatgggagaatccgctttggcctggcaaacaaggtgcatc
tacaattcctgtgtgtggtactatcagcactgtcagaagaaaatccctgtcgttatggtc
acagaagatgaatctgtcatcgggaaatacaacacggagacccaagaggtgtatgttgtc
tcttttcagatttacctggagactttttggcccaattttaaaggagccctggagctgtat
aaatctctaagagatacccatctagagcgcaagttagagagccgggagagtaatggcaaa
gagtatccggagcatctgccgctggaaattcttgaggctggcatcaagtctggcagatac
aaacagggtgttctcagtgtgaacaagcacagagctcaactggaatcatttgtacgactt
cagggcttaggaggcaaagaaacagatattcagagtgacatttttatccatggaaccaag
ccacggaacagagcaatacatggagatttggtggcagtggagttgcttccgaagtctgaa
tggaaggggagaactggagctctgtgcgagaatgaaacagatgagaaagtgggggatatg
caggctgaggttatgccaacaggtcgtgtggtgggaatcatgcagcggaactggagagat
tatgtggtaactttcccagctaaagaggacactgaaacccagggtaaaaacacccagaag
gtccttgttatgccctgggactacagaattcccaaaataagaataagcactcagcaagca
gaggctttacagaattacagggttgtggtgaggatagactcttgggaatcaaactcactc
tatcctaatggacactttgtgcgagccctaggacgtgctggaaatctagaggctgaaatt
gcgactattctggtggagaacagtattagtttgaaccccttctctgaagctcagctagca
gagatgccctcaaacactcatgagaatccgtggcaggtaaagccagaagagggcgaccgt
ttggatctgcgggaaactcacttggtgttcagtattgatccaaagggctgtgaggatgtg
gatgatgcactatccattcgtgtgctacccagtggggacttggagctaggagtgcacatt
gcagacgtcacacactttgtgcagcataatacttacacagacatcgaagctcggtccagg
gctactacatattaccttgcagacagacgcaatgacatgcttccgctaatcttgagtgct
gatctctgctctcttcttggagcagtggacaggtatgcagtaagtgtaatttgggaaatg
gactgcagtacgtatgagatccgaagagtatggtatggcaggacaattattcgctcctcg
tacaagctcagttatgaggtggcacaacagttgttggatggggaccttgagcctctgagt
actgaaaaggaattgcatccactaaagcaggacccagctcggctacaacagctactgtgg
gcagtgggcaagatgactgaggtagctcatgccaccagaatgcggagaaacatgagtggg
gctttagaactggaaggagtagaggtccgtgtccagctaggagagaaacacagcatcgat
gaccttgtccctaagcagccccttcaggtgcatgagaccattgcagagtgtatgatctta
gccaatcactgggtggccaagaagatttgggagagttaccctcagcatgcactgctacgc
cttcaccccccacctcgccaggaattcttccaagagctaaaggagtgtgcaaaggccaga
ggattttccattgatacaagatctaataaagctcttgcagattcacttgaccaagcacat
gacccttctgatcctctggtgaaccagctgttgcgaatgatggctacacaggctatgtct
aatgctcggtacttctctacaggctcatacacagaggatgagttctatcactatggtttg
gctctggaaaaatacactcattttacttcaccaattcgccgttatgctgacatagtggtg
cataggctgctcttggccgctgtcaacaaaggcccaaaggatcatttgcttggaaacaag
gatctggaggaactgtgcagacacataaatgcccgcaaccgggcagcccagcaatgccag
aagcaatccactgagctgttccagtgcatgttctttaaagacaaagatccagactctgac
cagcgatgcatcagtgatgctgttatatacggcattcgcacaaatggtgtgctgctcttc
atacccagatatggcattaaaggagcagcgtacttgaaaaacacagatgggcttgtcctt
gcatgtgaggaagatggccagtgccgttgggtgcatggatccctgcagcgattaccagcg
caaattgtggtcactactcaggaagccaagtcgttctccttttgtctgtttgatcatgtg
actgtgaggatacggatccagtcatctcgcttccaccctgacagcattcgactggaaata
atcagcaacaggcctaatccttcccaggaagcactgccgtctgcatcaaatcctcagctg
ttgaggactgagctggtaaaggaagtcaccagaacggcagtagaggctcagttggcagtt
gagggggcagcagagctgaagcctgtggagcgttaccaggaatacaggcaaacccaggga
cagagtctgtacactatgctggaggagctctgggacctggccctactggatgtatctggt
gcataa
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