Xenopus laevis (African clawed frog): 444494
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Entry
444494 CDS
T01010
Symbol
rps27a.S, rps27a, rps27a.L
Name
(RefSeq) ribosomal protein S27a S homeolog
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03010
Ribosome
xla04120
Ubiquitin mediated proteolysis
xla04137
Mitophagy - animal
xla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
444494 (rps27a.S)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
444494 (rps27a.S)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
444494 (rps27a.S)
04137 Mitophagy - animal
444494 (rps27a.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
xla03011
]
444494 (rps27a.S)
04121 Ubiquitin system [BR:
xla04121
]
444494 (rps27a.S)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xla04147
]
444494 (rps27a.S)
Ribosome [BR:
xla03011
]
Ribosomal proteins
Eukaryotes
Small subunit
444494 (rps27a.S)
Archaea
444494 (rps27a.S)
Ubiquitin system [BR:
xla04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
444494 (rps27a.S)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
444494 (rps27a.S)
Exosomal proteins of colorectal cancer cells
444494 (rps27a.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
444494
NCBI-ProteinID:
NP_001086065
Xenbase:
XB-GENE-5741649
UniProt:
Q6GMC1
A0A974HGZ7
LinkDB
All DBs
Position
5S:25274495..25280115
Genome browser
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRE
CPSDECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaaaaccctcacggggaagaccatcaccctcgaggttgagccttct
gatactatagaaaatgtcaaggctaagattcaggataaggaaggtattcctcctgatcag
cagaggttgatctttgctgggaaacagctggaagatggccgcactctctctgactacaac
atccagaaggagtccactcttcatcttgtgctcaggctccgtggtggagctaaaaagagg
aagaagaagtcttacaccacccccaagaagaacaagcataagagaaagaaggtcaagctt
gccgtgctgaagtattacaaggttgatgaaaacggaaaaatcagccgcctgcgacgtgaa
tgcccttcagacgaatgtggcgccggtgttttcatggccagtcacttcgacagacattac
tgcgggaaatgctgtctgacttactgcttcaacaagccagaggataaataa
DBGET
integrated database retrieval system
