Xenopus laevis (African clawed frog): 444640
Help
Entry
444640 CDS
T01010
Symbol
rhbdl1.S, rhbdl, rhbdl1, rhbdl1.L, rrp
Name
(RefSeq) rhomboid, veinlet-like 1 S homeolog
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xla01002
]
444640 (rhbdl1.S)
Enzymes [BR:
xla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
444640 (rhbdl1.S)
Peptidases and inhibitors [BR:
xla01002
]
Serine peptidases
Family S54: Rhomboid family
444640 (rhbdl1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
DUF5580
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
444640
NCBI-ProteinID:
NP_001086211
Xenbase:
XB-GENE-953356
UniProt:
Q6GLW6
LinkDB
All DBs
Position
9_10S:complement(107185160..107207970)
Genome browser
AA seq
372 aa
AA seq
DB search
MDRSSMLRLIQGQLDPEHTGFVCAKTFAALVNDHELPLDPTKLEMLFALSQGNEDGQICY
SQLVDLISSKRSSSFRRAISSGQRALPRDVLLDQDGLGIYKRFVRYVAYEILPGEMERRW
YFYQHRPCPPPIFMAVVTLTQIIVFLCYGIKLNKWVLQTYHPEYMKSPLVYHPGHRARAW
RFLTYMFMHVGLEQLGFNTLLQLMIGVPLEMVHGILRISFLYLAGVLAGSLAVSVTDMRA
PLVGGSGGVYALCSAHLANVVMNWAGMRCPYKVLRMILALVCMSSEVGRAVWLRFSPPLP
AAGPQPSFMAHLAGAAVGVSMGLTILRSYEENLQDQCGWWVILLCYATFFAFAIFWNVFA
YELLGVQIPHPP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggacaggagttctatgctgcgactgatccaggggcagcttgacccagagcatacaggt
tttgtgtgcgcaaaaacatttgctgccctggtcaacgatcatgagctgcccctggacccc
accaagttggaaatgttatttgccctttctcagggcaacgaggatggacaaatctgctac
tctcagctggtggacctgatcagcagcaaaaggtccagtagtttcagaagggccatcagt
agtggtcaacgcgccctaccaagagatgttctacttgatcaggacgggctcggcatctac
aaaagatttgtacgttatgtggcctatgaaattttgccgggtgagatggagagacgctgg
tacttctaccaacaccggccatgcccaccacctatcttcatggcagttgtcactttaacg
cagatcattgttttcctctgttatgggatcaaactgaacaagtgggtcttacagacgtac
caccctgaatatatgaagagcccccttgtataccaccccgggcaccgcgccagagcttgg
cgcttcctcacctatatgttcatgcatgttggtctagaacagttgggatttaacactctg
ctgcagttaatgatcggagttcctttggagatggttcatgggatactgagaattagcttc
ctgtaccttgcaggggttttggcaggatcccttgcagtatcggtcacagatatgagagcg
ccactggtcggagggtcaggtggagtctatgccctgtgctctgcccatcttgccaatgtt
gttatgaactgggctggaatgcgctgtccatacaaggtccttcgaatgatactcgcactg
gtctgtatgagctcagaagtaggtcgtgcagtttggctccgtttctcccctccgctacca
gcagccggtccccagcccagtttcatggctcaccttgctggggcggctgttggtgtcagc
atgggcttgaccatcttgcgcagctacgaagagaacctccaggaccagtgcggttggtgg
gtcatcttactgtgttatgctaccttctttgccttcgctatcttttggaatgtcttcgcc
tacgaacttctaggagtgcagataccacatcccccctga
DBGET
integrated database retrieval system
