Xenopus laevis (African clawed frog): 444667
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Entry
444667 CDS
T01010
Symbol
samd4b.L, samd4b
Name
(RefSeq) sterile alpha motif domain containing 4B L homeolog
KO
K27396
protein Smaug
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
444667 (samd4b.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
444667 (samd4b.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
444667
NCBI-ProteinID:
NP_001086238
Xenbase:
XB-GENE-5831903
UniProt:
Q6GLT9
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All DBs
Position
8L:72585144..72616177
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AA seq
676 aa
AA seq
DB search
MKFRDQVSTLSDWFKGWNECEQTVALLSLLKRITRTQARFLQLCLEHSLSDCTEVHILET
EANSAALISQWHQESKEKVISLLLSHLPLLQPRNTEAKCEYMKLLQKVLAYTTESNLYIE
ESRQLLSYALIHPATTLEDRNSLALWLNHLEERFSTGYSRHGRIETPSAHLRQDSDEWQP
PVDPGIGEASLSWQDKPPRENGMMPFHSSNLVPSGIQNMGSNTVLSCQVHPSPLKRSMSL
IPTSQQGPGEWMGPDEVGSRSVFLTPDLAPLSPQSSVASSGSEQTEEVSAGRNTFTEDGS
GMKDVPTWLKSLRLHKYASLFAQMSYEEMMTLTEQHLECQNVTKGARHKIALSIQKLRER
PCVLKSLEKDILEGGNVRNALQELQQIVITPIKYYRPNQMDGTGREQTPSQRPNQDPSCK
GSDENQPPPGLPADGFQQQQSSPACDSEPAVPPIAEGDLPGQLTRVLGKVCTQLLVSRPD
EDNISCYLQLLEKCISHEAFTETQKKRLMSWKQQVLKLLRTLPRKALLEMQGWAFASNSL
PLAGSVGSSIARRGQRPFQMPPRVLPPSRINVMSPGSIGGVSPRHALTSPSTGSQGRQNL
WFANPGGSNSMPCPSHSSVQRTHSLPVHTSPQSILKFPPDCQVPGADLEINPRLESLCLS
MTEHALEEGTDKTSTI
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaaattccgtgatcaggtgagcacattgtctgactggtttaagggctggaacgaatgt
gaacaaacagtggcccttctatctttacttaagaggatcaccaggacccaggcacgcttc
ctgcaactgtgtttggagcactctttatcagactgtacggaggtacacatccttgagaca
gaggccaacagtgcagctctcatcagccagtggcatcaagagtccaaagagaaggtgatt
tctctacttctttctcacttgccactattgcagccccggaatacagaagccaaatgcgag
tatatgaaactgctgcaaaaagttctggcttacactactgagagcaatttgtacatagaa
gagagtcgccagttactatcctatgcacttattcatcctgcgactacccttgaagaccga
aactcgctggctttatggctcaaccatctggaagaacgattctctacaggctacagtcgt
catggaagaatcgaaacaccttctgcacatttacggcaggattcagatgagtggcagcct
ccagtggatcctggtattggggaggcaagtctcagttggcaggataaaccaccgcgtgaa
aatggcatgatgccctttcattcttctaacctagtgccctcaggcattcaaaatatgggg
agcaacacagtgctgtcctgccaggtgcatccaagtccactcaaacgttccatgtcgctt
attccaacatctcagcagggacctggtgaatggatggggccagatgaagtgggaagtcgg
tcagtgttcctcaccccagaccttgctccactgtctccacagagcagcgtggcatcatcc
ggcagcgagcaaactgaggaagtgagcgctggacgcaacactttcacagaagatgggagt
gggatgaaagatgtacccacctggttgaagagtttacgattgcacaaatatgcatcgttg
tttgctcagatgagctatgaagagatgatgacgctgaccgagcagcaccttgaatgtcag
aatgttaccaaaggggcaagacacaaaatcgccttgagtatacaaaagctccgggagaga
ccatgtgtcctcaaatccttagaaaaggatattttagaaggcggaaatgtgcgtaatgct
cttcaggagttgcagcagattgtcatcacacccattaaatactaccgtcctaaccagatg
gatggtactggcagggagcaaactccctcacagaggccaaaccaagatccaagctgtaaa
ggatcagatgagaatcaacctccgcctggactcccagcagatggtttccagcaacaacag
agtagcccagcttgtgattctgagccagcagtaccacctatagcagagggagatctccca
gggcagcttaccagagtgcttggaaaagtttgtacacagcttctggtgtcccgaccagat
gaagacaacatctcgtgttacctgcagcttttagaaaagtgcatttcacatgaggcattc
acagaaacccaaaagaagaggctgatgtcttggaagcagcaagttttgaaattactccgg
acgcttcccagaaaagcattgctggaaatgcagggctgggcgtttgcatccaactctctc
cccttagctggatctgtggggtcttccatagctcggagaggacagcgtccattccagatg
cctcctagggtactgccaccttcccgtattaatgttatgagccctgggtcaattggaggt
gtctctccaaggcatgcacttaccagcccgagcactggaagccagggtcggcagaacctg
tggtttgccaatcctgggggcagcaacagtatgccatgcccaagtcacagttctgtgcaa
cgcacacattcattacccgtacacacttctccacagagtattttaaagtttccccctgat
tgccaggtgcctggggctgatttagagattaacccccggttggagtccttgtgtctgagt
atgacagagcatgctttagaagagggaacagacaagacatcgaccatctga
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