Xenopus laevis (African clawed frog): 444671
Help
Entry
444671 CDS
T01010
Symbol
mkrn1.S, Makorin-1, mkrn1, rnf61
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
444671 (mkrn1.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
444671 (mkrn1.S)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
444671 (mkrn1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
Torus
zf_CCCH_4
zf-CCCH
zf-CCCH_DUS3L
zf-CCCH_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-ANAPC11
zf-rbx1
zf-C3HC4_4
zf-CCCH_3
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
444671
NCBI-ProteinID:
NP_001086242
Xenbase:
XB-GENE-959147
UniProt:
Q6GLT5
LinkDB
All DBs
Position
3S:complement(2937797..2947687)
Genome browser
AA seq
408 aa
AA seq
DB search
MAEAAAAPALLTSAASAGKAPLPAFPENPPVGVWTRHVTCRYFIHGVCKEGINCRYSHDL
ATSRSAMICRYFQRGCCAYGDRCRYEHNKPLQEDPTGDTCTAPSESLPEPSGNINSKAAE
LAASELASGGPRAQDWVNAVEFVPGQLYSGRAPEAYTQGTVKPDEGREEPADPELKKQLC
PYAAMGECRYGENCVYLHGDPCDMCGLQVLHPVDTCQRSQHIKSCIEAHEKDMELSFAVQ
RSKDIVCGICMEVVYEKTNPSERRFGILSNCSHSYCLKCIRKWRSAKQFESKIIKSCPEC
RITSNFIIPSEYWVEEKEEKHKLIHKYKEAMSSKSCRYFDEGRGTCPFGGNCFYRHAYPD
GRIEEPQPRQKSGMSSRYRIPSPSAGIDFGSLTSERAETRLRTRKTKL
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcggcggcgcctgctcttctcacatcagcagcttctgcagggaaggcc
ccgctgcccgcgttcccggagaatccccccgtgggtgtctggactcggcacgtcacctgc
agatatttcatacacggcgtttgcaaggaaggaatcaattgtcgttattcgcacgatctc
gccaccagccgatccgccatgatctgccgatatttccagcgaggctgctgtgcgtacgga
gaccggtgcaggtacgaacacaacaagccgcttcaggaagatccgactggagacacttgt
actgcgccgagcgagtccctcccggaaccaagcggcaacattaacagtaaggcggctgaa
ctggcagctagtgaactggcatctgggggtccacgagctcaagactgggtgaatgccgtg
gagtttgttccggggcaactctacagtggacgtgccccagaagcttacactcagggaact
gtgaaaccagacgagggcagggaggagcctgctgacccggagctaaagaaacaactgtgc
ccgtacgcggccatgggggagtgtcgttatggggagaactgcgtctatctgcacggggat
ccatgtgatatgtgtggccttcaggtgctccatcccgtggacacatgtcagagatcacag
cacataaagtcttgtattgaggctcatgagaaggacatggagctctcgtttgcggtccag
cggagtaaagacattgtgtgtgggatctgcatggaagtggtgtatgaaaagaccaatccc
agcgagcggagattcggcatcttgtccaactgcagccactcgtactgtctgaaatgtatc
cgcaagtggagaagcgccaaacagttcgaaagcaaaatcataaagtcttgcccagaatgt
cgtataacttcaaacttcatcattcccagtgaatattgggtagaggagaaggaggagaaa
cacaaactcattcacaagtacaaagaggccatgagtagtaaatcctgcagatatttcgat
gaaggccgcgggacctgcccattcgggggcaattgcttttacagacacgcttaccccgat
ggccgaattgaggagccgcagcctcggcaaaaaagtggaatgtccagcagataccggatc
cccagtcccagcgcaggaatcgattttgggagtttgacgagcgagagggcggagacccgt
ttgagaacgaggaagacgaagttgtga
DBGET
integrated database retrieval system
