Xenopus laevis (African clawed frog): 444695
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Entry
444695 CDS
T01010
Symbol
bgn.S, bgn, dspg1, pg-s1, PGI, slrr1a, xbgn
Name
(RefSeq) biglycan S homeolog precursor
KO
K08118
biglycan
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
444695 (bgn.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xla00535
]
444695 (bgn.S)
Proteoglycans [BR:
xla00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class I
444695 (bgn.S)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRRNT
LRR_5
LRR_9
LRR_14
Motif
Other DBs
NCBI-GeneID:
444695
NCBI-ProteinID:
NP_001086266
Xenbase:
XB-GENE-1003145
UniProt:
Q6GLQ6
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Position
8S:36392891..36422777
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AA seq
371 aa
AA seq
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MKVLLLLCSCILAIHALPFEQRGFWDFSLDDGMAMMKDEEASGVGPTPTDSIPDVGLSPM
PPMDLCPFGCQCHLRVVQCSDLGLTSVPKNLPKDTTLLDLQNNKITEIKKDDFKGLTNLY
ALVIVNNKISKINEKAFEPLQKMQKLYISKNNLEEIPKHLPKSLVELRIHENKIKKVPKG
VFNGLKNVNCIEMGGNPLENGGIEAGAFDGLKLNYLRISEAKLSGIPKGLPSSLNELHLD
NNKIQAIEKEDLNQYASLYRLGLGHNNIRMIENGSLSYMPVLRELHLDNNKLSKVPPGLP
DMKLLQVVYLHSNNITQVGVNDFCPIGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTD
RLAIQFGNYRK
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtattgcttctcttatgctcctgtatcttagccatccatgccctgccttttgag
cagagaggattctgggacttttccctggacgatggaatggctatgatgaaagatgaggag
gcctcgggagtaggtcctacacctactgacagtattccagatgttggtttgtcgcccatg
ccacctatggatttatgcccttttgggtgtcaatgtcatttgcgcgtggtgcagtgctct
gatttgggtctcacatctgtgcccaaaaaccttccgaaagacaccactctcttggatcta
cagaacaacaaaatcacggaaatcaaaaaggacgacttcaaaggactcaccaacctgtat
gctttggttatagtaaacaacaagatatcgaaaatcaatgaaaaggcctttgagcccctg
cagaagatgcaaaaactgtatatctctaaaaacaaccttgaggaaatacccaaacacctt
cccaaatctctggtggagctgcgtattcatgaaaacaaaatcaagaaggtccctaagggc
gtcttcaacggactgaagaacgtgaactgtattgaaatgggaggtaaccctctggaaaat
ggaggcattgaggctggcgcattcgacggcttgaagctgaactacttacgtatttcggag
gcaaaactgtctggcatccccaaaggtcttccaagcagcctgaatgagcttcaccttgac
aacaataagatccaggcaattgaaaaggaagaccttaaccagtatgctagcctgtacaga
ctgggtttaggacacaacaacatccgcatgatagaaaacggcagcctgtcttatatgcct
gttctgagagagcttcacttggacaataacaaactctccaaagtgcccccaggcttacca
gacatgaaattactgcaggttgtgtacctgcactccaacaacatcacccaggtcggcgtc
aatgacttctgccctataggatttggagtgaaacgtgcctactacaatggaattagctta
tttaacaaccccgttccctactgggaagtgcagccggccactttccgttgcgtcaccgac
cgattggctatccagtttggcaattacaggaagtaa
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