Xenopus laevis (African clawed frog): 444779
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Entry
444779 CDS
T01010
Name
(RefSeq) MGC81970 protein
KO
K13091
RNA-binding protein 23/39
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
444779
Spliceosome [BR:
xla03041
]
Common components
Common spliceosomal components
General mRNP proteins
444779
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
444779
NCBI-ProteinID:
NP_001086350
UniProt:
Q6DJM9
A0A8J0PY32
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All DBs
Position
9_10S:complement(36542847..36558926)
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AA seq
514 aa
AA seq
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MDMKNAAKRKKKSKSRSRSRERKRSKSKERKRSRDRERKRSKSREKKRSRSKERRKSRSR
SRERKFKGHYRSPYSGPKFGGGSGRGKIGIPHGVKLRKRSKSRSPPKREKSPVRGPIDNL
SPEERDSRTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDQS
SVPLAIGLTGQRVLGVPIIVQASQAEKNRAAALANNLQKGTAGPMRLYVGSLHFNITEDM
LRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGH
VTERTDASNASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSL
AFGAVADLQTRISQQSEALAAAAASAATISLAQSPLPTPATTQPIATQCFQLSNMFNPQT
EDELGWDSEIKEDVMEECNKHGGAIHIYVDKNSPQGNVYVKCSTITSAIAAVNALHGRWF
AGKMITAAYVPVPTYHSLFPDSMTSTQPLFPSRR
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggacatgaagaacgcagcaaaaagaaaaaaaaaaagtaaaagtaggagccgcagtcgt
gagaggaaacgcagcaagagtaaggaacgtaaacgcagcagagatcgggaaagaaagaga
agtaaaagccgtgaaaagaaacgcagccggagtaaggaacggcggaaaagccgctccaga
agcagagagcgcaagttcaaaggccactacagaagtccttattctggaccaaagtttggc
ggtggctctgggcgtgggaagataggaatacctcatggcgtgaagttaaggaaaaggtca
aagagcagaagtcctccgaagagagagaaaagtcctgtaaggggtccaatagataatctg
tctcctgaagagagagattcgcgcactgtgttctgtatgcaactggctgctaggattcgc
ccaagagatttggaagaatttttctcaacagtaggcaaagtccgtgatgtgcgaatgatt
tcagacagaaattccaggcgctccaaaggcattgcttatgtagaatttgtggatcagagc
tctgtgccgcttgcaattggccttacaggccagagagttttaggagtcccaataatagtc
caggcttcacaggcagaaaaaaacagagccgctgcattagccaataatcttcagaaaggc
actgctgggccaatgcgcttgtatgtaggatcattacacttcaatataacagaagacatg
cttcgtggcatatttgagccttttggcaggattgaaagtattcagcttatgatggacagt
gagactggtcgctctaaaggatatgggtttattactttttcagattctgaatgtgccaaa
aaagcattggagcagttgaatgggtttgaactggctggccggccaatgaaagttggccat
gtcactgagcgaactgatgcatccaatgcaagctcatttcttgacagcgatgagctggaa
aggacaggaattgaccttggaactactggccgtcttcagctaatggctaggcttgcagag
ggcactggtttgcagatccctccagcagcacaacaagctctacagatgagtggctcatta
gcttttggagcagtagcagatctccagacaagaatttctcagcagagtgaagcactggct
gctgcagctgcatctgcagctaccatttctttggcacaatccccgctacctacccccgca
actactcaacccattgctacacagtgcttccagctttccaacatgtttaacccacaaaca
gaggatgagctaggctgggactctgaaattaaagaggacgtcatggaggaatgcaataaa
cacgggggagccattcacatttatgtagataaaaactcccctcagggcaatgtctatgtc
aaatgttcaaccattacatctgctattgctgctgttaacgctctgcacgggaggtggttt
gctggtaagatgatcaccgctgcttatgtaccagtcccaacgtaccacagcctgttccct
gattccatgacctcaactcagcctttgtttccttctcgccgatga
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