KEGG   Xenopus laevis (African clawed frog): 445871
Entry
445871            CDS       T01010                                 
Symbol
nhej1.S
Name
(RefSeq) non-homologous end-joining factor 1 isoform X1
  KO
K10980  non-homologous end-joining factor 1
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    445871 (nhej1.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xla03400]
    445871 (nhej1.S)
DNA repair and recombination proteins [BR:xla03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     445871 (nhej1.S)
SSDB
Motif
Pfam: XLF XLF_CC XRCC4
Other DBs
NCBI-GeneID: 445871
NCBI-ProteinID: XP_018094233
Xenbase: XB-GENE-5750977
UniProt: A0A1L8ENT6
Structure
LinkDB
Position
9_10S:54112171..54161471
AA seq 362 aa
MYGTFHLQHLFTFPSLAFSVSTSRWRTDICCIDETRNYCVFVFLAGRCSSWTRREQTQDM
SLSQEMDARLLQLPWRSLRIADCIFMGKVCFTESSYALLLSDLSSMWCEEAKADIIQDRA
RELNKRLKAPVSSFLSYLSQIVFPVLNSKDNGQNIFSCHRSEAELLLQVKSQLSGLPFYW
SFHCKEATVSTVCRHLVRPLKSMTEALESQNQELCLLLKKKDAEIQEYQDSGAVLTRDRL
KTEVFDELKFQKSFLAEKVQGLCMSGKAPGFSEQLQQLYDAVIAPKAPTHPKEEDTGNSA
SHRPMAESSSISFEKTVPTQERTEGGAVSEPSQVPQSSVSCLTHRPPAGASKPKKKAKGL
FM
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgtacggtacattccatttgcaacatctattcactttcccaagccttgcatttagcgta
tctaccagcaggtggcgcactgacatctgctgtattgacgaaacccggaactattgtgtg
tttgtgtttctggccggaaggtgcagcagctggacccggagagagcagacacaggacatg
tctttgtcgcaagaaatggatgcccgactcttgcagctgccctggaggtcgctccgcatc
gcagactgtatttttatgggcaaggtttgctttacagagtccagctatgccttgcttcta
tctgatcttagcagcatgtggtgtgaggaagcaaaggccgacataatacaggatcgcgca
agggaactgaacaaacgtctgaaagccccagtctcttctttcctatcatacttgtcccag
attgtctttcctgtgctgaactccaaggataacgggcagaatatattctcttgtcacagg
tcagaggcggagttgttgctgcaagtcaagagtcagctttctggccttcccttttactgg
agcttccactgcaaggaggccacagtcagcacggtctgccgccaccttgtgcgccctctg
aagtccatgacggaggctctagaaagccagaatcaggagttgtgtctgctgctgaagaag
aaagatgccgagattcaggaatatcaggacagtggagctgtgctaactcgagatcgcttg
aaaactgaagtctttgatgagctgaaattccagaaatccttcttggcagagaaagtccaa
ggtctgtgtatgtctgggaaggctccaggattcagtgagcagctccagcaactgtatgac
gctgttatagcgcctaaggcaccaacacatcccaaggaagaagatacgggaaacagtgcc
agccatcgccccatggctgaatccagtagcatttcatttgagaaaacagtaccaacacag
gagagaacagagggaggagcggtgtcagaaccttctcaggtgcctcaatcttctgtttcc
tgcctgacccatcggcccccagctggagcttccaaacccaaaaagaaggcaaagggactg
tttatgtaa

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