Xenopus laevis (African clawed frog): 446226
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Entry
446226 CDS
T01010
Symbol
fscn1.S
Name
(RefSeq) fascin-like
KO
K23551
fascin 1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
446226 (fscn1.S)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
446226 (fscn1.S)
Membrane trafficking [BR:
xla04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
446226 (fscn1.S)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
446226 (fscn1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fascin
FRG1
DUF569
Motif
Other DBs
NCBI-GeneID:
446226
NCBI-ProteinID:
XP_018094539
Xenbase:
XB-GENE-17346730
UniProt:
A0A1L8EQ20
A0A974BVV5
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All DBs
Position
9_10S:83071530..83089684
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AA seq
486 aa
AA seq
DB search
MSSNSGPLQLGLINCNNKYLTAEAFGFKINASASSLKKKQVWSLEPAGEDSSAVLLRSHL
GRFLSADKDGKVFGEIDTPGPECRFLVSAQGDGRWALQSELYGRYFGGSEDRISCFSPSV
SPAEKWGVHLAMHPQFTLYSVTRKRYARLNGRGDELSVERDVPWGVDSLITLVFQENRYS
IQTPDQRLLASDGSLRDQSGPDTAYTLDISAGKVAFRASDGRYLTSSGPSGTMKAGKNSK
AGRDELFVLERSCPQVVLTAANGRNVSTRQGVDLSANQDEESDQETFQLEINKDTKMCAF
RTHTGKYWTLSSNGGIQASASTLNSSCYFEIDWCDRRITLKGVNGKYVTAKKNGQLSASV
DTPAETELFLMKLINRPLIVLRGEHGFIGCRKLTGTLDSNRSIYDVFELEFNDGAYSLKD
GTGKYWTVGSDMSVTSSSPTQVDFFFEFCDYNKVAIKVNGLYLKGDHAGVLKANAETVDP
TTLWEY
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaactctggaccccttcaactgggactcattaactgcaacaacaagtacctc
acggcggaggcgttcggcttcaaaatcaatgcttcggccagcagcttaaagaagaagcaa
gtgtggagcctggagccggcgggggaagattccagcgccgttttacttcggagccactta
ggccgcttcctttccgcggacaaagatgggaaggtgttcggggagatcgatacgccgggg
cccgagtgccgcttcttggtcagtgcgcagggggacgggcgctgggcgctgcagtctgag
ttgtacggccgctactttggaggctccgaggaccggatcagttgtttctctccttcggta
tcacccgcagagaagtggggagtccacctggccatgcacccccagttcaccctgtacagc
gtcacccgcaagcgctacgcccgtctcaatggccgcggggacgagttgtcggtggaacgg
gacgtgccgtggggggtggactcgctcatcactctcgtcttccaggagaaccgctacagc
atccagacccccgaccaacgcctcctcgcctccgacggaagcctgagagaccagtccggc
cccgacaccgcttacacgctggacatctccgccggcaaagtggccttcagggctagtgac
gggcgctacttgacctcgtccggccccagcggaaccatgaaggcaggaaagaacagcaag
gccgggagggatgaactatttgtgctggagagaagctgcccgcaagtggttctgactgct
gccaatggcaggaacgtgtctacaaggcaaggagttgatctttcagcaaatcaggatgag
gagagtgaccaggaaacatttcaactggaaatcaacaaagatacaaagatgtgcgctttc
cggactcacactggaaagtattggaccctttccagcaatggagggattcaggcatctgct
tctactctgaatagcagctgttattttgaaattgactggtgcgaccgtaggatcaccctt
aagggagttaatggaaaatatgttacagccaagaagaatgggcaactgtctgcttctgta
gatacaccagcagagaccgagctctttttaatgaaacttattaaccgtccactgatcgtt
ctgaggggtgagcatggtttcattggctgccgtaaattgactggaacccttgatagcaac
cgctccatttatgatgtatttgaactggaattcaatgacggtgcttacagcctcaaagat
ggcactgggaaatactggactgtgggaagtgatatgtccgttaccagcagtagtcccact
caggtggatttcttctttgaattctgtgactacaacaaagtggcaatcaaagtcaatggc
ctttatctgaaaggtgaccatgctggggttctgaaagccaatgctgagaccgttgaccct
acaacactctgggaatactaa
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