Xenopus laevis (African clawed frog): 446228
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Entry
446228 CDS
T01010
Symbol
cyfip1.L
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04810
Regulation of actin cytoskeleton
xla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
446228 (cyfip1.L)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
446228 (cyfip1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
446228 (cyfip1.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
446228 (cyfip1.L)
Factors involved in mRNA localization
Other mRNA localization factors
446228 (cyfip1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
LRIF1
Motif
Other DBs
NCBI-GeneID:
446228
NCBI-ProteinID:
XP_018102622
Xenbase:
XB-GENE-1194393
UniProt:
A0A1L8HGY3
A0A974DRC7
LinkDB
All DBs
Position
2L:complement(119270808..119334868)
Genome browser
AA seq
1253 aa
AA seq
DB search
MTTQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSILFQPNFNTNFEDRNAFVTGIARYI
EQATVHSGMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVDVLEPEVT
KLMNFMYFQRNATERFCAEVKRLCHAERRKDFVSEAYLMTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVIPGYEELLAD
IVNLCVDYYENKMYLTPGEKHMLLKVMGFGLYLMDGSLSNIYKLDAKKRINLNKIDKFFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSSSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDAEYRKLFELSLQGLQLLSQWSAHVMEVYSWKLVHPT
DKYSNKDCPDNAEEYERATRYNYTSEEKFALVEVVAMIKGLQVLMCRMESVFNHAIRHTI
YAELQDFAQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWGSGCEPFNDPALRGEKDPK
TGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTIMDIEKFHRESF
FYTHLLNFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIDMSMPWILTDHILETKEASM
MEYVLYSLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAHYKVVSGG
LLLDKRLRADCKNQGANISQGTSNRYDTLLKQRHVQLLGRSIDLNRLITQRISAALYRSL
ELAIGRFESEDLTSIVELDGLIEINRMTHKLLSKYLTLDSFDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTYRFVRTVMPFSQEFQRDKQPNAQPQYLFGSKLLNLAYSS
IFSYYRHFVGPPHFKVICRLLGYQGIAVVMEELLKVVKSLLQGTVLQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNTLLFCLLIEQSLSLEEVC
DLLHAAPFQNILPRVHVKEGERLEAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRVQTFLDDAIWRGPLASNGVMHVDECMEFHRLWSAMQFVYCI
PVGAHEFTVEQCFGDGLNWAGCMIIALLGQHRRFDVLDFCYHLLKVQKHDGKDEVIKSVP
LKKMVERIRKFQILNDEIFAILDKYSKSGDGENTSVEHVRCFQPPIHQSLASN
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccaagtgacgctggaggacgctttgtccaatgtagatctgttggaggagctg
ccgttaccagaccagcagccctgcattgagccccctccttcctcaatacttttccagcct
aattttaacactaacttcgaagaccgaaatgcatttgtcacagggattgctagatatatt
gaacaagctactgtacattctggcatgaatgaaatgcttgaagaagggcaggaatatgct
gtgatgctatatacatggagaagctgttcaagagccataccacaggttaaatgcaatgag
cagcctaaccgagtggaaatctatgaaaaaactgtggatgtattggagcctgaggttact
aagctgatgaacttcatgtacttccagagaaatgccacggaacggttctgtgcagaggta
aaacgcctgtgtcatgctgagcgacggaaggattttgtatctgaagcctacctgatgacc
cttggcaaatttatcaatatgtttgctgtcttggacgagctcaaaaacatgaagtgtagt
gttaaaaatgaccactctgcatacaagagagcagctcaatttctacgaaaaatggctgac
ccacaatcaatccaggagtctcagaacctgtctatgtttctggccaatcacaataagatc
actcagtctttgcagcagcaactagaagttattcctggttatgaagagctccttgctgac
atagttaatttgtgtgttgactactatgaaaataaaatgtatctgactcccggggagaaa
cacatgcttctaaaagtaatgggctttggactgtatcttatggatggcagcctgagcaac
atctacaaactggatgccaaaaagagaattaacctgaataaaatagacaagttctttaag
caactacaagtggtccccctgtttggtgatatgcaaattgagcttgcaagatatattaaa
acaagtgcacattatgaagaaaataagtccaggtggacctgtacctcatcaagcagcagt
ccacagtataatatatgtgagcagatgattcagattagagaagaccacatgcgctttatt
tctgagttggcccgctatagcaatagtgaggtagtgactggatcaggccgccaagaagcc
caaaagacagatgcagagtaccgaaaactttttgaattatctttgcaagggcttcagctc
ctgtctcagtggagtgcacatgtaatggaagtgtactcctggaagcttgttcacccaacc
gataaatactccaataaagactgcccagacaatgcagaagaatatgaacgtgctacaaga
tacaactataccagtgaggagaaatttgctctggttgaggtcgttgccatgatcaaaggt
ctacaggtcctcatgtgcagaatggaaagtgtatttaaccatgccatccgccatactatc
tatgctgagctgcaggattttgcccaggtcacactaagggagccactgagacaagctatt
aagaagaagaaaaatgtaatacaaagcgtgctccaagctatcagaaagaccgtttgtgac
tggggatctgggtgtgaaccattcaatgaccctgcactcagaggtgaaaaagacccaaag
actggatttgatattaaagttcccagaagggctgttggaccatcgagcacccagctttac
atggtgagaaccatgctagagtccctcattgctgacaaaagtggttccaagaaaaccctg
agaagtagcctagagggtcccaccattatggacatagaaaaatttcaccgagaatctttc
ttctacacacatttgcttaatttcagtgagactttacagcagtgctgtgacttgtcccag
ttatggttcagggagtttttcttggagttgacaatgggtcgcagaattcagtttcctatt
gatatgtcaatgccgtggattctgacagaccatatcctggagaccaaggaggcatctatg
atggagtatgtcctctactctctggatctctataatgacagcgcacattatgcacttaca
aagttcaaaaaacagtttctttatgatgaaattgaagctgaggtaaacttgtgctttgac
cagtttgtctacaagttagcggaccaaatatttgcccactacaaagttgtttctggcggc
cttcttttagacaagcgtcttagagcagactgtaaaaatcagggagccaatatctcccag
ggaacgtccaatcgctatgatacattgctgaagcagagacatgtacagcttctagggagg
tcaattgacttgaatcgcttaattactcagagaatttcggctgctctgtacagatcactg
gagctggccattgggcggtttgaaagtgaagatctgacctcaattgttgagctggatggt
ctaattgaaataaatcgaatgacacacaagttgttgagcaagtacttgaccttggacagt
tttgatgctatgttccgtgaggccaatcataatgtgtctgctccttatggcagaatcacc
ctccatgtcttttgggagcttaactatgactttcttccgaattactgctacaatgggtcc
acttacaggtttgtgcgtactgtgatgcctttctctcaggagttccagcgggacaagcaa
ccaaatgctcaacctcagtacttatttggttccaagcttttgaatttggcatacagcagc
atttttagctactacaggcactttgtgggccccccacacttcaaagtgatctgccgactt
ttggggtatcaagggattgcagtagtcatggaggaactactgaaagtcgtcaagagcctg
ctacaaggtactgttcttcaatacgtgaaaaccttaatggaagtcatgcccaagatctgc
cgccttcccagacacgagtatggctctccaggtatactagaatttttccatcaccagctg
aaagacatagtggagtatgcagagctaaaaactgtgtgcttccagaacctgagggaagtg
ggcaatactctcctcttctgccttctcatagagcagagcttgtccctggaagaagtctgt
gacctgcttcatgcagctccctttcagaatatactcccaagggtgcacgtaaaggaaggt
gaacgattggaagcgaagatgaagagactggaatccaagtatgcgcctctgcacctagtt
ccactcattgagagactgggaactccccagcaaattgctatagcaagagaaggggatctc
ctgaccaaggaacgtctttgttgtgggctttccatgtttgaagtcatcctgacccgagtc
cagaccttcttggatgatgctatatggcgcggccctctcgccagcaatggtgtgatgcac
gtggatgagtgtatggaattccatcgactttggagcgccatgcagtttgtctactgtatc
ccagtgggagcacacgagttcactgtagagcaatgctttggtgatggactaaattgggcc
gggtgcatgatcattgcacttctgggacagcaccgtcgctttgatgttctagatttctgc
tatcaccttctgaaggtccagaaacatgatggcaaagatgaagttatcaagagtgtgccc
ttgaaaaaaatggttgaacgcatccgcaagttccagatattgaatgatgaaatatttgcc
atcttagacaagtactcgaagtctggagatggagagaatacctccgtagagcatgttaga
tgttttcagccacccattcaccaatctctggccagcaactaa
DBGET
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