Xenopus laevis (African clawed frog): 446230
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Entry
446230 CDS
T01010
Symbol
taf2.S
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
446230 (taf2.S)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xla01002
]
446230 (taf2.S)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
446230 (taf2.S)
03036 Chromosome and associated proteins [BR:
xla03036
]
446230 (taf2.S)
Peptidases and inhibitors [BR:
xla01002
]
Metallo peptidases
Family M1
446230 (taf2.S)
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
446230 (taf2.S)
Coactivators
SAGA/TFTC/STAGA complex
446230 (taf2.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
446230 (taf2.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
Peptidase_M1_N
SR-25
AP3D1
Motif
Other DBs
NCBI-GeneID:
446230
NCBI-ProteinID:
XP_018079409
Xenbase:
XB-GENE-968257
UniProt:
A0A8J0SYA8
LinkDB
All DBs
Position
6S:complement(124239941..124305363)
Genome browser
AA seq
1206 aa
AA seq
DB search
MSLAAVGGSGTVPSTMNKKKGDKGFESPRPYKLTHQVVCINNINFQRKSVIGFVELTICP
TVTSLNRIKLNSKQCRIYRVRVNDLEAAFLYNDPTLEVCHHESKQRNLNYFSNAYAAAVT
AVDPDAGNGELCIKVPSELWKLVDELKSLKVYIEFSLDQPKGGLHFVVPNVEGSMAERGA
HVFSYGYQNSTRFWFPCVDSYSELCTWKLEFTVDASMVAVSNGDLVEAVYTHDMRKKTFH
YTLAIPTAAPNISLAVGPFEILVDPYMHEVTHFCLPQLLPLLKHTTAYLHEVFEFYEEIL
TCRYPYSCFKTVFVDEAYMEVASYASMSIFSTNLLHSSMIIDQTPVTRRFLAHSLAQQFF
GCFISRMSWSDEWVLKGISGYIYGLWMKKTFGVNQYRHWIKDELDTIVAYELKTGGVLLH
PIFSSGKEKDNPASHLHFSIKHPHTLSWEYYNMFQCKAHLVMRLIENRISMEFMLQVFNK
LLSLANTASSQKFQSHMWSQMLVSTSGFLKSISNVSGKDIQPLIKQWVDQSGVVKFYGSF
AFNRKRNVLELEIKQDYTSLGTQKYVGPIKVTVQELDGSFNHTLQIEENSLKHDIPCHSK
SRRNKKKKIPLMNGEEVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRY
ERDVVAQEESILALESFPTPASRLALTDILEQEQCFYRVRMTACFCLAKIANSMVSTWTG
PPAMKSLFTRMFCCKSCPKIVKTNNFMNFQSYFLQKTMPVSMALLRDIHNLCPKEVLYFI
LDLIKYNDNRKNKFSDNYYRAELIDAMSNSVTPAVSVNNESRTLDNLNADVRLMLEEITR
FLNMEKLLPSYRHIITVSCLRAIRILQKNGHVPSDPTLFKSYAENGHFVDVRVAALEAVV
DYTKVDRSCEDLQWLLNMAQNDPVPYIRHKIFYMLSKNPPFTKTIESPLCNEALVDQLWK
LMNSGTSHDWRLRCGAVDLYHILFGLSRPSCLPLPELGLVLNLKEKKAVLNPTIIPEPSA
SHPDPVPSVGMHGQVTAFPSNEEDSKEAVASVLSQGVKRKAEAPLDSSLEPGQVLEKIED
SNKVKLKMREEEEIDMDTVHDSQAFIYHHLNMLERPSTPGKEQSGLDLHMPLPSTPLLAF
MKESSSSKHSDHHHHHHHDHKKKKKKHKHKHKHKHKHESKDKERELLPFSNSPVSGRFIK
SPSLSD
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgagcctggcagctgtaggaggcagtggtaccgtgcccagcacaatgaataagaagaaa
ggagacaagggctttgagagccccagaccttacaaattgacccaccaggttgtctgcatc
aacaacatcaacttccagagaaagtctgtcataggctttgtggaattaacaatatgtccc
acggtgaccagcctgaacaggatcaagctaaacagcaagcagtgccgaatatacagagtg
agggtgaatgatctagaagctgctttcttatacaatgacccaactctggaagtctgccac
catgagtccaaacagaggaatcttaattatttttccaatgcatatgcagctgcagtaact
gcggtagatcccgacgctgggaatggagaactatgcattaaagtgccatctgaactgtgg
aagcttgtagatgagttaaagagccttaaggtatacattgaattctctttggatcagcca
aaaggtggactccattttgttgtgccaaatgtggaaggcagcatggcagaacgaggggct
catgtattttcctatggataccagaattccacaaggttttggttcccttgtgtggattct
tattcagagctatgcacgtggaagctggagtttacagtggatgcctccatggtggcagtt
tctaatggagatttagtggaagcagtgtatactcatgacatgagaaagaaaaccttccat
tatacactagccattccaactgctgctcctaacatctctctcgctgttgggccatttgag
attctcgttgatccgtacatgcatgaggtgacccatttttgtttacctcaactgttaccg
ctattaaagcacactaccgcctacctccatgaagtgttcgagttctatgaagaaatattg
acatgccgatatccgtattcttgctttaaaactgtttttgttgacgaagcttatatggaa
gtggcatcttatgcatccatgagtatttttagcacaaaccttttgcacagctccatgatt
attgatcagacacccgtgaccaggagatttttggcacactctttagcccagcagtttttt
ggctgcttcatttcacggatgtcctggtctgatgaatgggtgttgaaagggatatctggc
tacatctatggtctttggatgaaaaaaacatttggtgtaaatcagtaccgacactggatc
aaagacgaactggacaccattgttgcgtatgaactgaagaccggtggggttttactccat
ccaatattttcctctgggaaagagaaagacaaccccgcttcccatctgcacttctcaatc
aagcacccgcacactctgtcctgggaatactacaacatgttccagtgcaaagctcatttg
gtcatgcgcctcattgaaaaccgtatcagcatggagttcatgcttcaggttttcaacaag
cttttaagcctggccaacacggcctcatctcagaagttccagtcccacatgtggagtcag
atgttggtttccacatctggcttcttaaaatcaatttccaacgtttctggaaaagacatc
cagcctctaataaaacaatgggtagatcaaagtggggtggttaagttctatggcagcttt
gcgtttaataggaaacgaaacgttttggaactggagataaaacaagactacacctctctg
ggaactcaaaaatatgtgggcccaattaaagtcactgttcaggagctggatgggtctttc
aaccacacactgcagattgaagagaacagcctaaagcatgacataccctgtcactcgaaa
agcagaagaaacaaaaagaagaaaatcccactgatgaatggagaagaagttgacatggat
ctttctgcaatggatgctgattcccctttgctgtggataagaatagacccagacatgtcc
gtgttgaggaaggtagagtttgaacaagctgatttcatgtggcagtatcagctacggtat
gaaagagacgtggttgcccaggaagaatccatccttgctcttgaatcctttcccactcct
gcatcacgcttagcattgacggacatccttgagcaggaacagtgcttttatcgtgtgaga
atgacggcatgcttctgcctggccaagattgctaactcaatggtcagcacctggactggg
cctccagctatgaagtccctctttacccgtatgttctgttgtaagagctgcccgaaaatt
gtgaagacgaataacttcatgaacttccaaagttactttctacagaagactatgccagtt
tccatggccttgttgagagacatccataatttatgtcccaaggaagtcctttattttatt
ttagacctcatcaagtacaatgacaataggaaaaataagttttcagataactactacaga
gcggagctgattgatgcgatgtccaactctgtaacacccgcagtgagtgttaacaacgaa
tcccggaccctggataatctgaatgccgatgtccgcctgatgcttgaggaaattactcgt
tttctaaatatggagaagctcctgcccagttacaggcatattataacagtgagctgcctg
agagccattcgcattctacaaaagaacggccatgttcccagcgatcccactctgtttaag
tcatacgcagagaacggacactttgtggacgtccgagtggccgcactagaagcagttgtt
gattatacaaaagttgacagaagctgtgaagacctgcagtggctcctaaacatggcgcag
aatgatcctgtcccttatattcggcacaagatcttctacatgctctcgaagaacccccca
ttcaccaaaaccattgagtctcctctgtgcaatgaagctctagttgatcagctctggaag
cttatgaattcaggtacgtctcatgactggagattaagatgtggggctgtggatctgtac
cacatactctttggcctcagtcgaccttcatgcctaccactgccagagctcggattagtg
cttaatctgaaggagaagaaggctgtgctgaaccccaccatcattccagagccatcggcc
agtcacccagatccggtgccaagtgtcggcatgcatgggcaagtcacagcgttccccagc
aatgaggaagattccaaggaagctgtggccagcgttctgtcccaaggagtgaaacggaaa
gcagaggcgcctctcgactcatcactggagcctgggcaggtactggagaagattgaggac
agcaataaagtcaaactgaaaatgagagaagaagaggagattgatatggacacagtgcat
gacagtcaggctttcatatatcaccatctgaacatgttggagagaccctcaacaccaggg
aaggaacagtccggcttggatttacacatgccactcccatcaacacccttattagccttt
atgaaggaatccagctcgtccaagcacagtgatcaccatcaccaccaccatcatgatcac
aagaaaaagaagaaaaagcacaagcataaacacaagcacaaacacaagcatgaaagcaaa
gacaaagagcgggagctgcttcctttctccaatagtcctgtcagcgggcgcttcatcaag
tccccctcactttccgactga
DBGET
integrated database retrieval system
