Xenopus laevis (African clawed frog): 446265
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Entry
446265 CDS
T01010
Symbol
psmd1.L, psmd1
Name
(RefSeq) proteasome 26S subunit, non-ATPase 1 L homeolog
KO
K03032
26S proteasome regulatory subunit N2
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
446265 (psmd1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
xla03051
]
446265 (psmd1.L)
Proteasome [BR:
xla03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
446265 (psmd1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
HEAT
HEAT_EZ
AP3D1
Motif
Other DBs
NCBI-GeneID:
446265
NCBI-ProteinID:
NP_001086454
Xenbase:
XB-GENE-989965
UniProt:
Q4V874
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Position
5L:106930580..107001345
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AA seq
951 aa
AA seq
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MITSAAGILSLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDENFRSRQFA
ALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENAELPE
GEKKPIDGRLEGIVNKMFQRCLDDHKFKQAIGIALETRRLDVFQKTILESNDVPGMLAYS
LKVCMSLMQNKQFRNQVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVRED
NLLMVYQICFDLYESASQQFLSSVIQNLRTVGAPIPSVPGSTNTGTVPGASADSETMESE
DQASITVGSNAAESNPEPKDQISKMVKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAV
RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEAL
QLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGCLG
LGLAALGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQ
HEKILRGLAVGIAMVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIR
RLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESYNPHVRYGAAMALGICC
SGTGNKEAINLLEPMTNDPVNYVRQGALISSALIMIQQTEITCPKVSQFRQLYSKVISDK
HDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVLVFTQFWFWFPLSHFLS
LAFTPTSVIGLNKDLKMPKVQYRSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAK
KKEKEKEKKEEEKMEVDETEKKEEKKKEPEPNFQLLENPARVMPAQLKVLSMPEGSRYQP
FKPLSNGGIIILRDTSEEEEQLVEPVAAHGPKIEEEEQEPEPPEPFEYIDD
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgatcacttctgccgctggaatcctttcccttctggatgaagatgaaccacagctaaag
gaatttgcattgcacaaattgaatgctgtggttaatgatttctgggcagaaatctctgag
tctgtggataagattgaagtactgtatgaagatgaaaatttcagaagcaggcagtttgct
gctcttgtggcatctaaagttttttatcatcttggggcgtttgaagagtccctgaactat
gctcttggtgctggggatttattcaatgtaaatgacaactcggaatatgttgaaacaatt
attgctaaatgcattgaccactacaccaaacaatgtgtggaaaatgcagaactgcctgaa
ggtgagaagaaaccaatagatggtcgactagaagggattgtcaacaagatgtttcagcgc
tgcctggatgatcataagtttaagcaagccattggtattgcactggagacacgcaggcta
gatgtattccagaagaccattttagaatcgaatgatgtccctggaatgctggcatacagc
ctcaaagtatgcatgtccctcatgcagaacaagcagttcaggaatcaagtacttagagtt
ctggtcaaaatctacatgaacctggaaaagccagacttcattaatgtgtgccagtgcctt
attttcctagatgacccacaggcagtaagtgatattctggaaaagctggtgagagaagac
aatcttctcatggtgtatcagatctgttttgacttgtatgagagtgccagtcagcagttc
ctctcttcagttatacagaatctgcgtacagttggagcccccattccatctgtaccaggc
tccaccaatactggcactgttccaggggcttcagcagacagcgaaactatggaatcggag
gatcaggctagcatcaccgtaggaagcaatgcggcagaatcaaaccctgaaccaaaagat
cagatctccaagatggtaaagatcctcagtggtgagatggccatagaactacacttgcaa
tttttgatacggaacaataatacagacttaatgatcttaaaaaacactaaggatgctgta
agaaattctgtgtgtcacacagcaactgttatagcaaattcattcatgcactgtggcact
accagtgatcagttcctcagagataatttggaatggttagccagagccacaaactgggca
aagttcacagcaacagccagtttaggtgtcattcataagggtcacgaaaaagaggctctt
cagctaatggcaacttatttacctaaagacacctcaccgggatctgcataccaggaggga
ggaggactctatgctcttggactcattcatgccaaccatggaggtgacatcatagactac
cttctgaaccagcttaagaatgccagcaatgatattgtgaggcatggtggttgtctgggg
cttggtttggcagccctggggactgcacgacaagatgtgtacgaccttctgaaaactaac
ttgtatcaggatgatgcggttactggagaggcagcaggactggctctcggcttagtgatg
ctgggctccaaaaatgctcaggcaattgaagatatggtgggatatgcccaagagactcag
catgagaaaattttgaggggactggctgtgggcattgctatggtcatgtatggtcgaatg
gaagaagcagatgcgctgatagagagcctctgcagagacaaggatccgatccttcgcaga
tctggaatgtatactgtggctatggcatactgtggctcagggaataacaaggccatccgt
cgcctcctgcatgtggctgtgagtgatgtcaatgatgatgttagaagagcagctgtagaa
tctctgggcttcatcctgttcaggacaccagagcaatgcccgagtgttgtatccttgctg
tctgagagctataacccacatgtacgatatggtgcggcaatggccttaggcatctgctgc
tctggaactggaaacaaggaagcaatcaatctcctggagcctatgaccaatgaccctgtg
aattatgtacgtcagggagcccttatctcttctgccctcattatgattcagcagacagaa
atcacatgcccaaaggtcagtcagttccgtcagctctattccaaagttatcagtgacaaa
catgatgatgtgatggccaaatttggagccattttagcccaggggattttggacgcaggg
ggtcacaatgtgaccatttcattgcagtcccgcactggtcacactcacatgccctcagtg
gttggagttttggtcttcactcagttctggttctggttccccctttcacactttctttct
ctggcttttacaccaaccagcgtcattggacttaacaaagatctcaagatgccaaaagtt
cagtatagatcaaactgtaaaccatcaacatttgcttatcctgcaccattggaggtgccc
aaagagaaagaaaaagagaaggtatctactgctgtcctgtccatcacagccaaagccaaa
aagaaggagaaagaaaaagagaagaaagaggaggaaaagatggaagtggatgaaactgaa
aagaaagaagaaaagaagaaagagccagaaccaaacttccagcttcttgagaaccctgct
cgggtgatgccagctcaactgaaagtgctcagcatgccagagggcagtcggtatcagccc
ttcaagcctctttctaatggtggtattatcattcttcgagacacgagtgaagaggaggaa
caactggtagaacctgttgcagctcatgggcctaagatagaggaggaagagcaagaacct
gagcctccagagccatttgaatacattgatgactag
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