Xenopus laevis (African clawed frog): 446276
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Entry
446276 CDS
T01010
Symbol
ddx52.S, ddx52
Name
(RefSeq) DEAD-box helicase 52 S homeolog
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xla03009
]
446276 (ddx52.S)
Enzymes [BR:
xla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
446276 (ddx52.S)
Ribosome biogenesis [BR:
xla03009
]
Eukaryotic type
90S particles
Helicases
446276 (ddx52.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
446276
NCBI-ProteinID:
NP_001086456
Xenbase:
XB-GENE-993523
UniProt:
A0AUS6
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Position
2S:64484713..64504910
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AA seq
614 aa
AA seq
DB search
MDAFDLFRKLGSGARFDLKRFSGDAEKFKLKKGDESNLNSSTALKSLDFFGTEEKPVSRT
NDTNKKLGQRGNGDSDVTNKASKRKKDLGRGVKKRKIQESDAGDVSAGDESILWMSSLEA
KLQDGKGKSKKKLSIEKMKQQRLEKINHFRNEHKIYVQGTDIPEPAATFQQLEQEYKILS
KIMQNVKDAGFHTPTPIQMQAIPIMLHDREILASAPTGSGKTMAFSIPILAHLQCPKNKG
CRALVISPTRELASQTHRELVKLSDGIGFRIHVIDKAAVSAKRFGPKSSKKIDILVTTPN
RLIYLLKQDPPGIDLSSVEWLIVDESDKLFEDGKTGFRDQLASIFVACTSHLLKRAMFSA
TFAFDVEQWCKLHLDNVVSVSVGARNSAVETVEQSLLFVGSETGKLLAMRDLVKKGFAPP
VLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQRDNVIQSFREGKIWVLICTALLAR
GIDFKGVNMVINYDFPAGAVEYIHRIGRTGRAGHKGKAVSFFTEDDKPMLRSVASVIQKA
GCPIPDYIKSFRKLQKKQKKRMIKRPLKRDQIRTTPKYILEKAKRKRNIIKRNLKEKEKV
SAQEDNKQPEAHET
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgttcgatctctttcggaaactgggatccggggccaggtttgatttgaagcgg
tttagcggggacgctgagaagtttaagttaaaaaaaggcgatgagagtaatttaaattca
tctactgccttgaaaagtcttgatttttttggtactgaagagaaaccggtttcaagaaca
aatgatacaaacaaaaaattaggtcaaaggggaaatggagattctgatgtcacaaataaa
gcaagcaaaagaaagaaagatttggggagaggtgtaaagaaacggaaaatacaagagtcc
gatgcaggagacgtctctgctggagatgaatccatcctgtggatgtcctctcttgaggca
aaactacaagatggtaaaggaaaaagcaagaaaaaactctcaatagagaaaatgaagcag
caaagactggaaaagataaaccacttccggaatgagcataaaatttatgtccaaggcaca
gatattccagaaccggctgccacattccaacaacttgagcaagagtataagattctctcc
aaaataatgcaaaatgtgaaagatgcgggcttccatacaccaacgcctatccagatgcaa
gcgatacccatcatgctacatgaccgggaaatattggcatctgctcctacaggctctggg
aagacaatggctttctctattccaattttagcacaccttcaatgcccaaagaataaaggc
tgtagagcattggtcatatcccccacaagagaacttgcaagccagactcaccgagaactg
gtcaagctttcagatggaattggatttcgcattcatgtaattgacaaagcagctgtgtct
gcaaaaaggtttggaccaaaatcttcaaagaaaattgatatcctggtgacaacgcctaat
aggttaatttatttgctcaaacaagatccccctggcattgatctctccagtgttgaatgg
ttgattgttgatgaatcagacaaattatttgaagatggaaagacaggattccgagatcag
ctggcttctatatttgtggcatgcacatcccatctgcttaaaagagccatgttcagtgca
acatttgcttttgatgtagaacagtggtgcaaactacaccttgacaatgtggtttccgtt
tctgttggtgcaaggaactctgcagtggagactgtagaacagtcgctgttatttgtcgga
tcagaaacaggcaagcttttggctatgagggacctcgttaaaaagggcttcgctccacca
gtactggtgtttgtacagtctatcgaacgggcaaaggagctgtttcatgaactcatttat
gaaggaatcaatgtggatgttatacacgcagaaagaacgcagcagcagagagacaacgtt
attcagagtttcagagaagggaaaatctgggttcttatttgcacagccttgctagcaaga
ggaattgattttaaaggtgttaatatggtcatcaactatgatttccctgctggcgccgtg
gagtacatacaccgaatagggcgaactggtcgagccggccacaagggtaaagcagtcagt
ttctttactgaggatgataagcctatgcttcgcagtgtagcgagtgtgattcagaaagca
ggatgtccaattccggattatattaaaagttttcgcaaactacaaaaaaaacagaaaaag
aggatgatcaagcgccctctaaagagagatcagatccgcacaactccaaaatacattctg
gaaaaagcaaaaagaaaaaggaacatcattaaaagaaatctgaaagaaaaggaaaaagtt
agtgctcaagaagacaacaagcagccagaagcacatgaaacatga
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