Xenopus laevis (African clawed frog): 446307
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Entry
446307 CDS
T01010
Symbol
vps35.L, mem3, vps35
Name
(RefSeq) VPS35 retromer complex component L homeolog
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
446307 (vps35.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
446307 (vps35.L)
Membrane trafficking [BR:
xla04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
446307 (vps35.L)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
446307
NCBI-ProteinID:
NP_001086473
Xenbase:
XB-GENE-17346514
UniProt:
Q6DJN1
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Position
4L:66449497..66494062
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AA seq
511 aa
AA seq
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MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFSQSRKDILKDMVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEQTNEEVTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDKEKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPPDIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVDIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNGLEYNTEVGSQEQVDAIMNLVSTLIQDQPDQPAEEPD
PEDFADEQSLVGRFIHLLRSDDPDQQYLVCN
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcccacgacccagcagtccccccaggatgaacaggagaagctcctggatgaagccatt
caggctgtgaaggttcagtctttccagatgaaaagatgcctggataaaaacaaactgatg
gatgctttgaaacatgcctctaacatgctgggtgagctgcgaacttcaatgttgtctcca
aagagctattacgagttgtacatggctatatcagatgaacttcactatttagaggtgtac
ctcacagacgagtttgcaaaaggaagaaaagtagctgatctttatgagcttgtacaatat
gctggaaatattatccccaggctttacctgctgatcactgttggagtggtatatgtcaag
tctttttcccagtcgaggaaggacattctaaaagatatggtagagatgtgtcgtggtgtg
caacatcctttaaggggactctttctccggaattaccttttgcaatgcaccaggaatatt
ttgccagatgagggggagcagacaaatgaggaagtaacaggagatatcagtgactcaatg
gattttgtgttactgaactttgcggaaatgaacaagctgtgggtgagaatgcagcaccaa
ggacacagtcgagacaaagagaagagggaacgggagagacaggagctccgaatcttggtg
ggaacaaacttagtcagactaagccaactcgaaggcgtcaatgtggagagatacaaacag
attgtgttgcctggaatattagaacaagttgtaaactgcagagatgctctcgctcaagaa
tacctcatggagtgcataattcaggtttttccagatgaatttcaccttcagactctaaac
cctttccttagagcttgtgctgagctccaccaaaatgtgaatgtgaagaatataattatt
gctttaattgacaggctagctctgtttgcacatcgggaagatgggcccggcataccacca
gatatcaagctgtttgatattttctctcagcaggtggccacagtcatacagtccagacag
gacatgccttcggaagatgtggtttccttacaagtgtctctcattaatcttgccatgaaa
tgctatccagatcgtgttgattatgttgataaagtgcttgaaacaactgtggacatcttc
aacaagctcaacctcgagcacatcgccacaagcagcgctgtctccaaggaacttaccagg
cttttaaaaatacctgttgatacttacaacaacatcctaactgtgctcaagctgaaacac
ttccatcctctctttgaatattttgactatgaatctaggaagagcatgagttgttatgtc
ctcagcaatggactggaatacaatacagaggttggctcccaagagcaggtggatgctatc
atgaacctggtttcaacgcttatacaggatcagcctgatcagcctgcagaggaaccagat
ccagaggactttgcagatgaacaaagtcttgtaggcagatttattcatctgttacgatca
gatgatcctgaccagcagtacttggtatgtaactaa
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