Xenopus laevis (African clawed frog): 446342
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Entry
446342 CDS
T01010
Symbol
gabpb2.S, ankhd1, gabpb2
Name
(RefSeq) GA binding protein transcription factor subunit beta 2 S homeolog
KO
K09454
GA-binding protein transcription factor, beta
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
446342 (gabpb2.S)
03029 Mitochondrial biogenesis [BR:
xla03029
]
446342 (gabpb2.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
446342 (gabpb2.S)
Mitochondrial biogenesis [BR:
xla03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
446342 (gabpb2.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ank_KRIT1
DUF7141
Motif
Other DBs
NCBI-GeneID:
446342
NCBI-ProteinID:
NP_001086507
Xenbase:
XB-GENE-955087
UniProt:
Q6DFK5
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Position
8S:99263381..>99279087
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AA seq
380 aa
AA seq
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MALDLGKRLLEAARVGEDNEIRVLMQNGAPFTTDWLGTSPLHLAAQYGHYTTVKVLLQAG
ISRDARTKVDRTPLHMAAADGHAPIVDLLIKNGANVNARDMLEMTALHWASENSHHDVVH
LLIKSGADVNSYNKFGKTPIDIALDKNNHELLVTMQDALQGKPLTRRPNVISVSSPHYIL
TPVANMKSSNARGTEVVTLEPSVQQLVENGGQRVITIVADGIQLGNLPGQLSVGSLRSPR
VVTIQNGDQAVEVAEEQVVEETVVLEVSPPSPPAKKYRVASAATEEGPEENSNKERQLLE
QQLEEANLRACEFRQQLREKEQEAENYRVKLESLERQQVNGERFTVLEDGDTIIVSAEEL
AGVQVTEVETVEHHSDIPAS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgacctcggcaagagattactggaagctgcccgcgtcggagaagataatgaa
atacgggtgttaatgcaaaacggcgcacctttcactacagactggcttgggacatctccc
ctgcacctggctgctcagtacggccactacaccactgtcaaagtactcctgcaggccggc
attagccgagacgcccgcactaaggtggataggacccctctgcatatggcagctgcagat
ggacacgcccctatcgtagatctgctcatcaagaatggtgccaatgtcaatgccagggac
atgttagagatgaccgctttgcactgggcctcagagaacagtcaccacgatgtggttcac
ttgctgataaagtccggggcagatgtcaactcttacaacaagttcggcaagactcccatt
gacattgcgctggacaagaacaaccatgagctgttggttaccatgcaggatgcgctgcag
ggcaaacccctaacaaggagaccaaatgtcatctctgtatcttccccacactatatcttg
actcctgtagcgaatatgaaatcctctaatgctcgaggcactgaagttgtgacattggag
ccgtcagtgcagcagttggtagaaaacggaggtcagagagtgatcacaatcgtagcagac
ggcattcagctgggcaacctccccgggcaactttctgtcgggagcctacgcagtcctcga
gtagtaaccatccagaatggagatcaagcagtggaggtggctgaagagcaagttgtagaa
gagactgtcgtgctggaagtgtcgcctccttctcctcctgccaaaaagtacagagttgca
tcagctgctacagaggaaggcccagaggagaacagcaataaagagaggcaactgttggag
cagcagctggaggaagccaacctccgtgcctgtgagttccgacagcagctccgagagaaa
gaacaagaggcagagaactatagagtcaaactggagagtctggaaaggcaacaagtgaac
ggggaaagattcacagtattggaggatggagacaccattattgtctcggccgaagagctg
gcaggagtgcaggtcacagaggtagagactgtggagcaccattccgacattcccgcctct
taa
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