Xenopus laevis (African clawed frog): 446411
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Entry
446411 CDS
T01010
Symbol
ercc4.L, ercc11, ercc4, rad1, xpf
Name
(RefSeq) excision repair cross-complementation group 4 L homeolog
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03420
Nucleotide excision repair
xla03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
446411 (ercc4.L)
03460 Fanconi anemia pathway
446411 (ercc4.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xla03032
]
446411 (ercc4.L)
03400 DNA repair and recombination proteins [BR:
xla03400
]
446411 (ercc4.L)
DNA replication proteins [BR:
xla03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
446411 (ercc4.L)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
446411 (ercc4.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
446411
NCBI-ProteinID:
NP_001086576
Xenbase:
XB-GENE-986818
UniProt:
Q6DFB2
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All DBs
Position
9_10L:complement(100543329..100568046)
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AA seq
897 aa
AA seq
DB search
MAPLLEHENQIFLDLFHEDGLVITARGLGIDRILQNFLKLYCDPGNLVLVLNTNTAEEEY
LIDQLRSEGITQLPRIINNEVATGERYDVYTQGGVLFVTSRILVVDFLTDRIPANLITGI
LVYNAHKIIESCQEAFILRLYRQKNKQGFIKAFTDNPVAFHAGFCQVERVMRNLFVKKLY
LWPRFHVSVNSFLDKHKPEVVELHVSMTPSMLAIQSSILDIMNACLKELKRFNPALEVED
LSLENAIGKAFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTMLQYLSQYDCVTFLNLLE
SMKASEKAFGQNSGWLFLDSSTSMFVHARARVFHVPDSKAIKKSKQSDPKEKQDGKKLVL
ESNPKWEALSEVLKEIEQENKNSEALGGPGRVLICASDDRTCSQLREYVAVGAEALLMRL
YNKTFGRDEKAAEVWIKSRKAMKAKGNNKSMKTSIHKKTEGKAKQKKNNKKTELTLTQMI
GKGEEDEMGKDGEEETYGEESMSQESSIEEPKYEDLQLNLPSDSYYGILKEPLTVIHPLQ
GCSDPYGLTRVLHEIEPRYVVLYDSEVSFVRQLEIYRASKQKPLRVYFLIYGGSTEEQRY
LTSLRKEKEAFEKLIREKASMVIPEERDGRDETNLDLQRDVTSTSDSADTRKAGGQVQNN
VQQTIIVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILTPDICVERKSVSDLIGSLNNG
RLYTQCVSMCRYYKKPILLIEFDPNKPFSLVSRNSIHQEISVNDITSKISLLTLHFPRLR
ILWCPSPHSTAELFEELKQNRPQPDSATAMAITANSESIPESEKYNPGPQDVLLKMPGVN
AKNCRAIMNHVTNIAELTTLSLEKLTEILGNSTFAKQLHEFMHTSYTEAVSQGKAKR
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggctccactcttggaacatgagaatcagatattcttggatctcttccacgaggatggt
cttgtcatcacagcccgaggcctaggcattgacagaatcctgcagaattttctgaagctt
tattgcgatccggggaatctggttttggtgctgaacacaaacacagcagaggaggagtac
cttatagaccagctgagatctgaaggcattacacagttaccccgcattatcaataatgag
gttgccactggggagagatatgatgtctacacacaagggggtgtcctgtttgtcacaagt
cgaattcttgtggtggattttctcactgatcggattcctgcaaacctgattactggaatc
cttgtgtataatgcacacaagatcatagaatcctgccaagaagcttttatactgcgcttg
tatcgacagaagaataagcagggctttattaaagccttcacagacaatccagttgcattt
cacgctggattctgccaagtggaacgagtaatgagaaacctgtttgttaaaaagctgtat
ctatggccaaggttccatgtatctgtaaattcatttttggacaaacataagccagaagtc
gttgagctgcacgtctccatgaccccttccatgctagccatccagtcttccatattagat
ataatgaatgcttgcttaaaagaactcaagcgcttcaatccagcactagaagtagaggat
ttgtccttggaaaatgcgattggaaaagcttttgacaagactattcgtcactacttagat
ccactgtggcatcaacttggagcaaagaccaagtccttggtccaggacctgaagatcctt
cgtaccatgttacagtatctatcacagtatgactgtgtgactttcctgaaccttctggaa
tcaatgaaagcaagtgaaaaggcatttgggcagaattcaggttggctgtttcttgactca
agcacttccatgtttgtgcacgctcgagcccgagtcttccatgttcctgactccaaagca
attaagaagtcaaaacaatcggatccaaaagaaaagcaagatggcaagaagctggtttta
gagagcaaccctaagtgggaagcattaagtgaagttctaaaggagattgaacaagaaaac
aagaacagcgaggctttgggagggccaggtcgagtgctgatttgtgccagtgatgaccga
acttgctcacaacttagggaatatgtagctgttggggcagaagcacttttaatgagactt
tacaataaaacctttgggagggatgaaaaagcagcggaggtttggataaaaagcagaaaa
gccatgaaggctaaaggcaacaacaaaagcatgaaaacatccattcataagaagacagaa
ggcaaagctaaacagaagaaaaacaataaaaagacagaactgaccttaacgcaaatgata
ggcaaaggagaggaagatgaaatggggaaggatggggaagaagaaacgtatggagaggaa
agtatgagccaagagagcagcattgaggaaccaaagtatgaagacctccagctgaacttg
ccttcagattcctattatggcattttaaaagagccactcactgttattcaccctttgcaa
ggttgtagcgacccctatggactgacaagggtactgcatgaaatcgagccaagatatgta
gttctttatgattccgaggttagctttgttcgccagcttgaaatttacagagcaagcaag
cagaaacctttaagggtatatttcctaatctatggaggttccacagaagagcagcgttac
ctgacttctttgaggaaggaaaaggaggcgtttgagaagcttattcgagagaaagcaagc
atggtgattcctgaggagagagatgggagagatgagaccaacctagaccttcagagagat
gtaacttcaacttctgactctgctgacacaagaaaagctggaggacaggtgcagaataat
gtgcaacaaactattattgttgatatgcgggagttccgtagcgagcttccatctttaatt
catcgccgcggaatagatattgaaccagttactctggaagtgggagattatattctaaca
cctgatatatgcgttgagagaaaaagtgtaagtgatctgattggctctctaaacaacgga
agattatacacccaatgtgtttctatgtgccggtattacaagaagcccattcttcttatc
gagtttgatcccaacaagcctttttctctagtatcaaggaactctattcaccaagagatc
tcagtcaatgatatcacatccaaaatctctttactcactcttcattttccacgactgcgt
atcctttggtgcccatctccccactcaacagcagagctatttgaggagctaaagcagaac
cgtccacagcccgattctgcgacggcaatggccattactgccaactcagaaagcatacca
gagtctgagaagtacaatcccggccctcaggacgttctcctaaaaatgccaggcgtaaat
gccaaaaattgcagggccatcatgaaccatgttacaaatattgcagaactgacaacgctg
tctctggaaaaactgacagaaattctaggaaattctacctttgctaagcaactccatgaa
ttcatgcacacctcctatacagaggctgtttctcagggaaaagcaaaaaggtga
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