Xenopus laevis (African clawed frog): 446443
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Entry
446443 CDS
T01010
Symbol
ddx55.S, ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xla03009
]
446443 (ddx55.S)
Enzymes [BR:
xla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
446443 (ddx55.S)
Ribosome biogenesis [BR:
xla03009
]
Eukaryotic type
Pre-60S particles
Helicases
446443 (ddx55.S)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
Tyr-DNA_phospho
SHOCT
SBF_like
Motif
Other DBs
NCBI-GeneID:
446443
NCBI-ProteinID:
NP_001086608
Xenbase:
XB-GENE-972465
UniProt:
Q6AZV7
A0A974I1W6
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Position
1S:complement(149512107..149522550)
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AA seq
594 aa
AA seq
DB search
MENVTEGTWDSLPQKLNGSIRRTLEELKFTHMTPVQSATIPLFMNNKDIAAEAITGSGKT
LAFVIPLLEILLKREEKLKKNQVGALIITPTRELAVQIDEVLSCFTKHFPQFSQILLIGG
SNPVDDVRKFKEHGGNIIVATPGRLEDMFRRQADGLDLVICVKTLDVLILDEADRLLDMG
FEASINTILGFLPKQRRTGLFSATQTQELENLVRAGLRNPVRIAVKEKGVAATSTQKTPI
RLQNYYMICKADEKFNKLIAFLQKRKQEKHLVFFSTCACVEYYGKALEMLLKPVKVMCIH
GKMKHKRNRIFTEFRKINSGILVCTDVMARGIDIHEVNWVVQYDPPSSASAFVHRCGRTA
RIGHHGSALVFLLPMEESYVSFLSINQKCPLQEMTELIISVDLLPKLKAMAETDRAVFEK
GMKAFVSYVQAYAKHECNLIFRVKDLDFSSLARGFGLLRMPRMPELKGKNFSDFVSTLID
TDSIAYKDKNREKQRQKMLKERKEKLETEGRKHFAKNKAWSKQKARKEKKQKVALKRKKE
EGSDIDEGDVDELLQDTRLLKRLKKGKITEEEFEKQLTAVGGKSEVEEGSEDSN
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgttactgaagggacgtgggactctctgcctcagaaattaaatggcagtatc
aggcggactctggaggaattaaaattcactcatatgaccccggtgcaatcagcaacaatc
cccttgtttatgaacaacaaagacattgcggcagaagcgataactggaagcggaaaaaca
ctggcattcgtcattccacttttggaaattctcctgaaaagagaagaaaagttgaagaaa
aatcaggttggtgctttaattataaccccaacacgtgaacttgcagtgcagattgatgag
gtgctctcatgtttcacaaagcatttcccacaatttagtcagattctcctaattggggga
agtaaccctgtggatgatgtaagaaaatttaaagaacatggtggaaacattattgtggcc
acaccgggacgactggaggatatgttccgcagacaggctgatggactggatttagtcatc
tgtgtgaaaacccttgatgttctaattttggatgaagcagatagacttttggatatggga
tttgaagcaagcataaataccatattagggtttttgccaaaacagagaagaactggtctg
ttctcagcaacacaaactcaagagctagagaatctggtgcgagctgggcttaggaatcct
gtccgtatcgctgtgaaggagaagggggtagcagcaaccagtacacagaaaacacctata
cgtctacagaattactacatgatctgcaaggcagatgaaaagttcaacaaactcattgca
tttctgcagaaaaggaaacaagaaaagcacctggtatttttcagtacatgtgcctgtgtg
gaatattatggaaaagcactagaaatgcttttaaaacctgtgaaagtgatgtgtattcat
ggaaaaatgaagcataagcgcaaccggatttttacagagttcaggaagattaacagtggt
atattagtctgcacagatgtgatggcacgtggaattgacattcatgaagtaaattgggtt
gtgcagtatgatccccctagtagtgccagtgcctttgttcaccgatgtggacgtacagcc
cggataggtcatcatggaagtgcacttgtgtttctgcttcccatggaagaatcatacgtc
agttttctttcaataaaccaaaagtgcccactgcaagaaatgacagagctaataatttca
gtggatcttctccccaaattgaaagccatggcagagactgaccgcgctgtgtttgagaag
ggaatgaaagcatttgtgtcctatgtgcaagcgtatgctaagcatgagtgcaacttaatc
ttcagggtaaaagatttggatttttcttctctcgcccgaggatttggcctgctgaggatg
ccccggatgccggaattgaaaggaaagaatttctcagactttgtttccaccttaattgat
acagactccattgcatacaaagataagaacagagaaaaacagaggcagaaaatgctgaaa
gagcgaaaagaaaaactggagaccgaaggcaggaaacattttgcaaagaacaaggcatgg
tccaagcagaaagccaggaaggaaaagaaacagaaagtagcactaaaacggaaaaaagaa
gagggatccgatatagatgagggtgatgtggatgaattgctccaagacactagattattg
aagagactgaaaaagggcaaaattactgaggaggagtttgagaaacagctgacagcagtt
ggaggaaaaagtgaagttgaagaaggatctgaggactcgaactga
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