Xenopus laevis (African clawed frog): 446524
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Entry
446524 CDS
T01010
Symbol
taf5l.L, taf5l
Name
(RefSeq) TATA-box binding protein associated factor 5 like L homeolog
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
446524 (taf5l.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
446524 (taf5l.L)
03036 Chromosome and associated proteins [BR:
xla03036
]
446524 (taf5l.L)
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
446524 (taf5l.L)
Coactivators
SAGA/TFTC/STAGA complex
446524 (taf5l.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
446524 (taf5l.L)
STAGA complex
446524 (taf5l.L)
TFTC complex
446524 (taf5l.L)
SAGA complex
446524 (taf5l.L)
SLIK complex
446524 (taf5l.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
TFIID_NTD2
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
NBCH_WD40
RMC1_N
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_WDR19_1st
WD40_RFWD3
PEP5_VPS11_N
Beta-prop_EIPR1
Beta-prop_DCAF4
Ge1_WD40
PROPPIN
WD_LRWD1
eIF2A
DUF7165
Mala_s_1-like
Motif
Other DBs
NCBI-GeneID:
446524
NCBI-ProteinID:
NP_001086689
Xenbase:
XB-GENE-998045
UniProt:
Q6DE31
A0A974CWE7
LinkDB
All DBs
Position
5L:54351909..54359863
Genome browser
AA seq
587 aa
AA seq
DB search
MKRVRAEQIQLAVTCYLKRRHYIDIEGSLKQGLRLCQTAEEMAANLTVQAESSCTNAVSS
VPCSADAHQYEVQFARLRNFLSDADSPQSQEVTKLLYPLFVYLHLDMIQNSLKSAVDSFY
SRFHGMFVQYPGQKDIVEQLQTTMTMQDIHSNCKLRAFLDNKYVVCLQEDSYHYLLRFLQ
SDNNTALCKALALHIQLDVQPLKRTEYQLYNNMGSSSRGENSLDQSDVPTPILQNEAALD
QLQDCIKKVKDGPPSLTTISFYAFYNTEQLLNTAEISPDSRLLAAGFDNSCVKLWSLKSK
KLKAEPHRVDVSRIRLACDVLEEEEDDQAGTEMKILRGHSGPVYRTCFLSDSSGLLSCSE
DTSIRYWNLESYTNTVLYQGHTYPVWDLDVSPCSLFFASASHDRTGRLWCFDRTFPLRIY
AGHLSDVDCIKFHPNSNYLATGSSDKTVRLWSTQQGNSVRLFTGHRGPVLTLAFSPNGKY
LASAGEDQRLKLWDLASGTQYKELRGHTDNISSLTFSPDSSLIASASMDNSVRVWDIRNS
YCNTPSDGSSSELVGVYTGQTSNILSVQFMACNLLMVTGIAHDSQEH
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagtacgtgcagaacagattcagttggctgtaacgtgctacctcaagaggcgt
cactatatagatatcgaagggtccctgaaacaaggattaagactttgccagacagccgag
gagatggcagccaatctgacagtccaagcagaatccagctgtacaaatgcagtatcttca
gttccctgcagtgctgatgcacatcaatatgaagtgcagtttgcaaggctaaggaatttt
ctttcagatgcagattctcctcaaagccaagaggttacaaagctgctttaccctctgttt
gtatacctccatttggacatgatccaaaacagcctgaaaagcgcagtggatagcttctac
agtcgttttcatgggatgttcgtgcaatacccaggtcagaaggacattgttgagcaactc
caaaccaccatgacgatgcaagatatccactccaactgcaaactgagagcctttcttgat
aacaaatatgtggtctgccttcaagaggatagctaccactaccttttacgcttccttcaa
agtgataacaacactgctttgtgtaaggcgctcgctcttcacattcaactagatgtgcag
ccactaaagcggacagagtatcagctctacaacaacatggggtcatcatctcgaggagag
aacagccttgaccaatcagatgtgcccactccaattctgcaaaacgaggcagctctagat
cagttgcaagactgcataaagaaagtaaaagatggcccaccatcactcacaactatcagc
ttctatgctttctacaacactgagcagcttctgaatacagctgaaatttctccagatagc
agactgttagctgctgggttcgacaattcctgtgtgaaattatggagcttaaagtctaag
aagctgaaagcagaacctcacagagtggatgtgtcccgtatacggcttgcttgtgacgtc
ttggaagaggaggaagatgaccaagctggcacagaaatgaaaatacttaggggacacagt
ggaccagtgtacagaacctgttttctgtcagatagttcaggccttttatcctgttcggag
gatacatccatacgatactggaatcttgaaagttataccaacactgtcttgtatcagggt
catacatacccagtttgggatttggatgtaagtccttgcagtctgttttttgccagtgca
tctcatgaccgcactggtagactctggtgttttgaccggacattcccactgaggatatat
gctgggcacctgtctgatgtggattgcataaagttccaccccaactcaaattaccttgcc
acaggttccagtgacaaaactgtgagactgtggagcactcagcagggaaattctgtaagg
ctttttacaggacaccgtggcccagttctaactcttgccttttcacctaatgggaagtac
ctggcctccgctggtgaagatcagcgtctgaagttatgggacttggcatcagggacacaa
tataaggagctccgaggacatacagacaatattagcagtttaacctttagtccagacagc
agcttgatagcctctgcatccatggacaactcagttcgtgtgtgggatattcgcaattcc
tactgtaatactccctcagatggttcttctagtgagctagttggtgtttacactgggcag
acaagcaacattttgagtgtgcagttcatggcatgtaacctactaatggttacggggatt
gcgcatgacagtcaagaacattag
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integrated database retrieval system
