Xenopus laevis (African clawed frog): 446530
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Entry
446530 CDS
T01010
Symbol
nphp3.L, nph3, nphp3
Name
(RefSeq) nephrocystin-3
KO
K19360
nephrocystin-3
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xla03037
]
446530 (nphp3.L)
Cilium and associated proteins [BR:
xla03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
446530 (nphp3.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_7
TPR_2
TPR_8
TPR_MalT
TPR_16
TPR_14
TPR_19
TPR_17
NPHP3_N
TPR_11
TPR_6
NACHT
TPR_3
AAA_22
14-3-3
KAP_NTPase
Uso1_p115_C
DUF2225
AAA_16
AAA_19
T2SSE
Motif
Other DBs
NCBI-GeneID:
446530
NCBI-ProteinID:
NP_001086695
Xenbase:
XB-GENE-865745
UniProt:
Q6AZT7
A0A8J1KVS8
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All DBs
Position
6L:56071138..56110893
Genome browser
AA seq
1300 aa
AA seq
DB search
MGTASSLVNAGEVIEDTYGGGGGEDCVIPVEVKPKARLLRSSFRRGPRVIGASFKSTASV
DLEYAAEYERLKKEYEIFRVSKNNEVASMQKKEIKLDEENKRLRAELQALQKTYQKILRE
KESAVEAKYQAMERAATFEHDRDKVKRQFKIFRETKEKEIQDLLRAKRDLEAKLQRLQAQ
GIQVFDPGESDSDDNGTEVTVPSTQCEYWTSGALGSDPSMGSMMQLQQSFRGPEFAHSSI
DVEGPFANVNRDDWDAAVASLLQVTPLFSQSLWSNTVRCYLMSTAETQAEVEIFLRDYSP
KLQRMCETSGYFFQMVFFPEECESQHFAVRKWEIEKSSIVILFICSSLPSCLQEDCEEAF
LKNNEAKPRLIYHSIEDGRSDSDGLKQLLEQDTNKANKTKVVDHCGDPVEGAYKLYCHLE
QVIKQDLLGIEISDPDAKDESATMEDDDYGDVLWDVHDEQEQMEAYQQASQSICELGFQK
YYDRLNDLVAAPAPIPPLLISGGPGSGKSLLLSKWIQLQQKHSPNTLMLYHFVGRPLSSS
SEPSLIIKRLTLKLMQHSWSVSSLSMDPGKFLEEFPHWLEKLSIRYQGNIIIIIDSIDHI
QQSEKHMKWLIDPLPVNVRVIVSVNVETCPQAWRLWPTLHLDPLNSKDVKALINMECGGA
NILLTKEQERKLERHCRSATTCNALYVTLITKLLTWAGSTGKIEDVLQQCLQCQDTVSLY
RLVLRSVQEVMPSAKEKEFMREILCFISVSHNGVSECELMELCPGLTWEVLTSLIYHLYT
LVLLKYTCGLLQFQHLQAWDAVNLEYMQGGQNIISEYREKIIKHFTTQLSHDRVTWRSAD
ELTWLFQQQGEKQKLHKCLMNLFVSQNLYKRGHFAELLSYWQLVGKDKISMASEYFDALK
QYEKNCEGEEKMTSLADLYETLGRFLKDLGLLSQAVTPLQRSLEIRETALDPDHPSVAQS
LHQLAGVYMQSKKFGNAEQLYKQALEISENAYGSEHLRVARELDALAVLYQKQNKFEQAE
QLRKKSLKIRQKSARRKGSMYGFALLRRRALQLEELTLGKDTSDNARTLNELGVLYYLQN
NLETAETFLKRSLEMRERVLGADHPDCAQSINNLAALYNEKKQYDKAEELYERALDIRRR
ALSPDHPSLAYTVKHLAVLYKRKGKLDKAVPLYELAVDIRQKSFGPKHPSVATALVNLAV
LYCQMKKQDDALPLYERAMKIYEDSLGRMHPRVGETLKNLAVLRYEEGDYEKAAELYKRA
MEIKETETSVLGAKAPSGHSSSGGDTYSVQNTLPVSVFPE
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atggggacagcctcttctctggttaacgcaggagaagtcattgaagatacgtacggtgga
ggaggaggagaagactgcgtgattccggtagaagtgaaacccaaagcacgtttactacgc
agttcttttaggcgtgggcctagagttattggagccagctttaagtccacagcctcagtg
gacctggaatatgctgctgaatatgaaaggctaaaaaaagaatatgagatattccgggtc
agcaagaacaacgaggttgcctctatgcaaaagaaggagataaaactggatgaggagaac
aagaggttaagagccgagttacaggcattgcaaaaaacctaccaaaaaattctgagagag
aaagaaagtgcagttgaagcaaaataccaagcaatggaaagggctgctacttttgaacat
gatagagacaaagtgaagagacagtttaagatctttagggaaacaaaagaaaaagagatc
caggatttgctacgagccaaacgtgacctggaagccaagttacaaagactgcaggcccag
ggtatccaggtttttgatccaggagagtctgattcagatgataatggtacagaagtaact
gttcctagcacacagtgtgaatactggacaagtggagctctgggaagtgacccttctatg
ggtagcatgatgcagcttcagcaatctttccgtggccctgagtttgcacatagttctatt
gatgttgaagggccatttgccaatgtgaacagagatgactgggatgcagctgttgccagc
cttcttcaagttacgcctctcttctctcagtctctgtggagtaacactgtgcgatgctac
ttgatgagcactgcagaaactcaagctgaagtcgaaatcttcctgagggattattctcca
aagcttcagagaatgtgtgagacctcgggttatttctttcaaatggtctttttccctgaa
gaatgtgaaagccaacactttgctgtacgaaagtgggaaattgaaaaaagttcaatagtc
attttattcatatgctcatccttgcccagctgtctgcaggaggactgtgaggaagcattc
ctaaagaacaatgaagcaaaacctcgtttaatatatcacagtattgaagatggtaggtct
gactcggatggcttgaaacagctgctggaacaagacactaataaagccaacaaaacaaag
gttgttgatcactgtggagatccagtggaaggagcatataagctatattgtcatcttgag
caagttatcaaacaggatttattaggtattgagatatctgatcccgatgcaaaggatgag
tctgcaactatggaagatgacgactatggggatgtactgtgggatgttcatgatgagcag
gaacagatggaggcttaccagcaggcatctcagtctatatgtgaacttggctttcaaaaa
tattatgatcgcttgaatgacttagtggctgcacctgcacctattcccccactgcttata
tctggaggaccgggatcaggcaaatcattattgctatcaaaatggattcagcttcagcag
aaacattctccaaacactttgatgttgtatcattttgtcggaagaccattgtcaagcagc
tcagaaccatcattaatcataaaaaggctgactcttaagctaatgcagcactcctggtcc
gtatcatcattatctatggaccctggaaagtttcttgaagagtttcctcactggcttgaa
aagctatctatccgataccaagggaacattatcattattattgactccattgatcacata
cagcaatctgagaaacatatgaagtggctgattgatcctttaccagtgaatgttcgggtc
attgtttctgtgaatgttgaaacctgcccccaggcatggaggctttggccgactcttcat
cttgatccactgaattcaaaagatgttaaagcccttattaatatggagtgtggtggagca
aatatcttactaaccaaagagcaggaaagaaaactagagagacactgtcgatcagccaca
acttgtaacgctttatatgtaacactgataacaaaactacttacctgggctgggagcact
ggcaaaattgaggatgttctacagcaatgcttacagtgccaggatacagtttctctatac
aggctggtactgcgctctgtgcaagaggttatgccaagtgcaaaagaaaaggagtttatg
agggagattctttgctttatcagtgtgagccataatggggttagtgaatgtgagctgatg
gaactctgcccaggtctcacatgggaagtcttaacatctttgatatatcatctgtataca
ctggttcttttgaaatacacctgtgggctgctccagtttcaacacctacaggcatgggat
gctgtgaatctggaatatatgcaagggggtcagaatattatttctgagtacagagagaaa
ataataaagcattttactacacaactaagtcatgacagggtgacatggagaagtgctgat
gagctcacttggctctttcagcaacaaggagaaaagcagaaactgcacaaatgcctcatg
aacctctttgtctctcagaacctctacaaaagagggcattttgcagaacttctcagctat
tggcaacttgtggggaaagataaaatctcaatggcctctgaatactttgatgcattaaag
cagtatgagaaaaactgtgaaggagaggagaagatgaccagcctggcagatctttatgaa
acactgggacgatttctgaaagacttaggcctcctaagccaggcagtgactcctcttcag
aggtcattagagatccgagagactgctttggatccagaccaccctagcgtagcccagtct
ctgcaccagctagctggagtttatatgcagtcaaagaaatttggaaatgctgagcaactc
tacaaacaggcactagaaataagtgaaaatgcttatggcagtgaacacttgagagtagca
agggagcttgatgcactggctgtactgtatcagaaacaaaacaaatttgaacaagcagag
cagctacggaaaaagtcactgaaaattcgacaaaagtctgcaagaaggaaaggcagtatg
tatggttttgctttgttacggcgccgtgctctacagctggaggaacttacactgggcaaa
gacacatctgataatgctcggaccctgaatgaacttggggtgctttactatttacagaat
aatcttgaaacagctgaaacttttcttaagcgctcactggaaatgagagagcgggtactt
ggtgcagatcaccccgactgtgctcagtctataaataacctagctgcattatacaacgaa
aagaagcaatatgacaaggccgaagagctgtatgaaagggctttagacattcgtaggaga
gcgctgtctcctgaccacccttccctggcatatacagttaaacacctagctgttctttat
aaaagaaaaggtaagcttgataaagctgtgcctctttatgagctggctgtggatattcgc
cagaagtcttttggacccaaacatccaagtgttgctactgctctggtgaaccttgcagta
ctatactgtcaaatgaaaaaacaagatgacgccttaccactgtatgagagagcaatgaag
atttatgaagatagtttgggtcgaatgcatccgagagttggagagacactaaagaattta
gctgtgctaagatacgaagagggtgactatgaaaaggcagcagagctatataaacgagca
atggaaatcaaagagactgaaacatcggtcttgggagcaaaagccccttcaggacattct
tcaagtgggggagacacctacagtgtccagaacacattaccagtcagtgtattccctgag
tag
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integrated database retrieval system
