KEGG   Xenopus laevis (African clawed frog): 446537
Entry
446537            CDS       T01010                                 
Symbol
arpc5l.L, arpc5-b, arpc5l
Name
(RefSeq) actin-related protein 2/3 complex subunit 5-B
  KO
K05754  actin related protein 2/3 complex, subunit 5
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04144  Endocytosis
xla04530  Tight junction
xla04810  Regulation of actin cytoskeleton
xla05100  Bacterial invasion of epithelial cells
xla05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:xla00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    446537 (arpc5l.L)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    446537 (arpc5l.L)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    446537 (arpc5l.L)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    446537 (arpc5l.L)
   05100 Bacterial invasion of epithelial cells
    446537 (arpc5l.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xla04131]
    446537 (arpc5l.L)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xla04812]
    446537 (arpc5l.L)
Membrane trafficking [BR:xla04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    446537 (arpc5l.L)
Cytoskeleton proteins [BR:xla04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     446537 (arpc5l.L)
SSDB
Motif
Pfam: P16-Arc Utp12 Utp13 APC_N_CC
Other DBs
NCBI-GeneID: 446537
NCBI-ProteinID: NP_001086702
Xenbase: XB-GENE-490528
UniProt: Q6DE18
LinkDB
Position
8L:18244565..18262254
AA seq 152 aa
MAKNTLSSRFRKVDIDEYDENKFVDDQLQEEPAEPQGPDEAEVDSLIRQGELLRAFQSAL
RNSPVNSKNQVAKERTQAIVLKVLTSFKSNEIEKAVNTLDPNGIDLLMKYIYKGFEKPTE
NSSAILLQWHEKAFVIGGLGSIVRVLTSRKTV
NT seq 459 nt   +upstreamnt  +downstreamnt
atggcaaagaacacgctgtcttcgcgtttccgcaaggtggacatagacgagtacgacgag
aacaaatttgttgacgatcagctgcaggaggaaccggccgagcctcaagggcctgacgag
gccgaggtggacagtctgatcagacaaggggaattgctccgagcattccaatctgcctta
aggaattctcctgttaactccaagaaccaagtagcgaaggagagaacccaggcaatcgta
ctcaaggtcctgacgtcgttcaaaagcaacgagattgagaaggcagtgaacacgctggac
ccgaatgggattgacctcctcatgaaatacatctacaaggggtttgaaaaacctacagag
aacagcagcgccatattgctacagtggcatgaaaaggcattcgtaataggaggccttgga
tccatagtccgagttctcacctcacgaaaaactgtgtaa

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