Xenopus laevis (African clawed frog): 446614
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Entry
446614 CDS
T01010
Symbol
apex2.L, ape2, apex2, apexl2, xth2
Name
(RefSeq) apurinic/apyrimidinic endodeoxyribonuclease 2 L homeolog
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xla03400
]
446614 (apex2.L)
Enzymes [BR:
xla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
446614 (apex2.L)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
446614 (apex2.L)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
CDC27
Motif
Other DBs
NCBI-GeneID:
446614
NCBI-ProteinID:
NP_001086779
Xenbase:
XB-GENE-1012061
UniProt:
Q6DDT4
Structure
PDB
PDBj
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All DBs
Position
8L:13384005..13389350
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AA seq
517 aa
AA seq
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MKIVSWNINGIRATRVGLKETLDSLDADIICLQETKVTRDLLDEPSAIVEGYNSYFSFSR
VRSGYSGVATFCKSSTTPQAAEEGLSGVFCNRTGSVGCYGNTEQFLEEELQSLDQEGRAV
LTQHRILNCEDKEETLTVINVYCPRADPEKPERKTYKLRFYHLLQTRAEAILQNGGHVII
LGDVNTSHRPLDHCDPTDLETFEENPGRQWLNQFLGDPIPSQKGDSETVMPPSAGSGLFY
DSFRYFHPTQKNAFTCWCSASGARQTNYGTRIDYILGNRELVESEFLDSVIMPEVEGSDH
CPVKAFMKCQPIAANKCPPLCTKYLPEFAGRQQKLLQFLVKKENTLGNTTEESSELTGTP
SFTEGADISTVRKRPSDKLNSTSKKKSKIVTKNGQGNLLSFFKPERQKLTMATECNPIEV
PICKKEKTVQKDLQPATPAVKYNKPQTAFWKSLLKGPPPPPNCKGHSEPCVLRTVKKAGP
NCGRQFYVCARPEGHSSNPQARCNFFLWLTKKAGCED
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtgagctggaacatcaatgggatccgggcaactcgggtgggtctgaaggag
acgctggattccctggatgctgatattatctgtttgcaagagactaaagtcaccagggac
ctgctggacgaaccttcggccattgtggaaggctataactcctacttcagtttcagccgt
gtacggagtggttactcaggggtcgcaacattctgcaagagcagcacaaccccacaggca
gcagaggaagggctatctggagttttctgcaaccgtacgggttccgttggctgctatgga
aacaccgaacagttcttagaagaagagctgcagtccttagaccaggagggtagagcagta
ctgacacaacacaggatcttaaactgcgaggataaagaggaaacgctcactgtcatcaat
gtttactgccctcgtgccgaccctgagaaaccagagaggaagacctacaagctgcgcttc
tatcacctgctgcaaacacgtgctgaggccattttgcagaatggcggacatgtcattatc
ttgggagacgttaacacttcccacagacccctcgatcattgtgatccgacggatttggaa
acctttgaggagaatccaggacgccagtggcttaatcagttcctgggtgatcccatccca
tcccaaaagggagattcagaaacggtgatgccgcctagtgcaggatctgggcttttctat
gacagtttccgatacttccatcccacccagaaaaacgcattcacttgctggtgctcggcc
tctggggccagacagaccaattatggcactcgcattgattacattctgggaaaccgggag
ctagtggaaagtgaatttctggattcagtaatcatgccagaggtggaagggtcagaccac
tgtccagttaaggcttttatgaaatgccagcctatagctgctaacaagtgtcccccactg
tgcaccaagtatctgcctgagtttgctggccgacagcagaagttattgcagtttctggtg
aaaaaggagaacactttagggaacacaacagaggaaagctcagagctgactggcactccg
tcgtttacagaaggagctgacatcagtactgtacggaagcggccgtcagataaactgaac
agtacctcaaagaaaaagagcaaaatcgtgacaaagaatgggcaaggcaacctcctgagc
ttctttaaaccagaaaggcagaaattaactatggccacagagtgtaatcccattgaagtg
cccatttgtaaaaaggagaaaactgtccaaaaagatttacaacctgctactcctgcagtt
aaatataacaagcctcagactgccttttggaaatccttgctcaagggcccccctccacct
cctaactgtaagggccacagtgaaccctgcgtcctgcggactgtaaaaaaggctggtcct
aactgtggacgtcagttttatgtctgcgcccggcctgaaggtcattcatcaaatccccag
gctcggtgtaacttctttctctggctcaccaaaaaagctggatgtgaggactga
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