Xenopus laevis (African clawed frog): 446659
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Entry
446659 CDS
T01010
Symbol
trim23.S, trim23
Name
(RefSeq) tripartite motif containing 23 S homeolog
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
446659 (trim23.S)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
xla04031
]
446659 (trim23.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
446659 (trim23.S)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
446659 (trim23.S)
GTP-binding proteins [BR:
xla04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
446659 (trim23.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arf
Roc
Ras
SRPRB
G-alpha
zf-RING_UBOX
zf-B_box
Gtr1_RagA
zf-RING_5
MMR_HSR1
zf-RING_2
zf-C3HC4
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
446659
NCBI-ProteinID:
NP_001086824
Xenbase:
XB-GENE-984758
UniProt:
Q6DDN3
LinkDB
All DBs
Position
1S:176146362..176168128
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AA seq
588 aa
AA seq
DB search
MRMRNEAERANSPFQGAHAQRRRQGLFSLPRKTKGPILPTKVLECGVCEDIFSLQGDKVP
RLLLCGHTVCHDCLTRLPLHGRAIRCPFDRQATELGDSGVWGLKKNFALLELLERLQNGA
SSQCSTVEEAIGGSGESIVRCDEDEAHMASVYCTVCATHLCADCSLHTHSTKTLAKHRRV
PLADKPYEKTLCSQHQVHAIEFVCLEDGCQTSPLMCCVCKEYGKHQGHKHAVLETEASQI
RASILDMAHCIRTFTEEISEYSRKLTGIVQLIEGGEQIVEDGIGMAHTEHVSGTAENARS
CVRAYFSDLHETLCRQEEMALSVVDAHVREQLMWLRQQQENMTILLSEVSTACLHCEKAL
QQDDCRVVLAKQEITRLLETLQKQQQQFTSLADHIQMDSSIPVTFTKDNRVHIGPKMEIR
VVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWK
HYYLNTQAVVFVIDSSHRERVAEAHSELAKLLTEKELRDALLLIFANKQDVTGSLSVEEM
TELLSLHKLCCGRSWYIQGCDARSGMGLYDGLDWLSRQLVAAGVLDVA
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatgcgcaacgaagccgaaagggctaattctcccttccagggtgcgcatgcgcaa
agaagacgacagggcctattctccctaccaaggaagacgaaagggcccattctccctacc
aaggttctggagtgtggtgtttgtgaagatatcttttcactgcaaggagataaagttcca
cgtttgctgctgtgcggccatactgtgtgccatgactgtctcacgcgtctccctcttcat
ggcagagccatacgttgtccatttgatagacaagctactgaactaggagactctggtgtt
tggggattaaagaaaaattttgctttacttgaactgctggaacggttacagaatggtgcc
agtagtcagtgtagcactgtagaggaggcaataggaggatctggagagagcattgtgcga
tgtgatgaagacgaagcccacatggcatctgtgtactgcacagtctgtgcgacccacctc
tgtgctgactgctccttgcatacacattccactaaaacactggccaagcaccgacgtgta
cctttagctgacaagccttatgaaaagactctgtgctcacagcaccaagtccatgctatc
gagtttgtatgtttggaagatggctgccagaccagtcccctcatgtgctgtgtctgcaaa
gaatatggaaaacatcaaggacacaaacatgctgttctggaaacggaagcaagccagatc
cgtgcttctattttggacatggcacactgtataaggacattcacagaggagatctctgag
tactccaggaaactgactggcattgttcagctgattgaaggaggcgagcagattgtagaa
gatggcattggaatggctcacacagaacatgtttcaggaactgcggagaatgcccgctcc
tgtgttagggcctatttttccgacctacatgaaacactttgccgtcaggaagaaatggcc
ctcagtgtcgtcgatgcacacgtgagagaacagctaatgtggcttcggcagcaacaagaa
aacatgactattctcttgtctgaagtgtcaactgcttgtctgcactgtgagaaggctttg
cagcaggatgactgcagagtggttctagccaagcaggagatcactcgacttctagagact
ctacagaaacaacagcagcagtttacatcgcttgcagatcacatccagatggactccagt
atccccgtcacattcacaaaggataatagagttcatatcggcccaaaaatggaaatccgg
gttgtgacattgggattagatggagcaggaaaaacgaccattttgtttaagctaaaacaa
gacgagttcatgcagcccatcccaacaattggtttcaacgtcgagactgttgaatacaaa
aacctgaagtttacaatttgggatgttggcggcaaacacaaacttaggccgttgtggaaa
cattattaccttaatacccaagcggtggtgtttgtgattgacagcagtcaccgggagaga
gtcgcagaagcacacagtgaacttgccaagctgctcactgagaaggaactgcgtgatgct
ctgctgctaatatttgccaataaacaggatgtcaccggttccctgtcagtggaagaaatg
actgagctcctgagtcttcacaaactgtgctgtggccgcagctggtacatacagggctgt
gacgccaggagtgggatggggctttatgacggactcgactggctctcaaggcaactggtg
gcagctggtgtgcttgatgttgcctaa
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