Xenopus laevis (African clawed frog): 446709
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Entry
446709 CDS
T01010
Symbol
wipi1.L, atg18, wipi49
Name
(RefSeq) WD repeat domain, phosphoinositide interacting 1 L homeolog
KO
K17908
autophagy-related protein 18
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04136
Autophagy - other
xla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
446709 (wipi1.L)
04136 Autophagy - other
446709 (wipi1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
446709 (wipi1.L)
03029 Mitochondrial biogenesis [BR:
xla03029
]
446709 (wipi1.L)
Membrane trafficking [BR:
xla04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
446709 (wipi1.L)
Mitochondrial biogenesis [BR:
xla03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
446709 (wipi1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_NWD2_C
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_HPS5
Beta-prop_WDR19_1st
BCAS3_WD40
Beta-prop_Vps41
CNH
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR19_2nd
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
446709
NCBI-ProteinID:
NP_001086874
Xenbase:
XB-GENE-17333101
UniProt:
Q6DDH3
LinkDB
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Position
9_10L:53512796..53526006
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AA seq
433 aa
AA seq
DB search
METGGGGEGVGDICCLSYNQDCTSLAIGMRSGYKLYSLSNVERLDLVHESCEVKDVYIVE
RLFSSSLVVVVSHTKPRQMNVLHFKKGTEICNYNYSGNILSIRLNRQRLVVCLEESIYIH
NIKDMKLLQTLLDTPRNPHGLCALSINHSNSYLAYPSSSSSGEVSLYDANSLKCECTIPA
HDSPLAAIAFNSTGTKLASASEKGTVIRVFSIPEGQKLYEFRRGMKRYVNISSLVFSMDS
QFLCASSNTETVHVFKLEQLPERPEENASWTGYVGKMFMAASNYLPTQVSDMMNQDRAFA
TVRLHFSGQKNACTLVTIQKLPRLLVTSSSGHLYVYNLDPQDGGECVLIKKHSLLGSAKS
ETDGDSDADGPVPVSYAATVARPGSAAAASTITGYSEDGGALRGEIIPEHELAVGPICLD
DEKEFPPVSIKNS
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggagaccggagggggcggagagggagtcggggacatttgctgtctgtcctacaaccag
gactgcacgtccctggctattggcatgaggtctggctacaaactctactctctaagcaac
gttgagcggctggatctggtgcacgagagctgtgaggtgaaggatgtttacatcgtggag
cgccttttctccagcagtctggtggtagtggtgagtcacaccaaaccacgccagatgaat
gtgctccacttcaagaagggcacagagatctgtaactataactactctggcaacatctta
tccatcaggctgaaccgtcaaagactggtagtgtgtttggaagaatcaatctacatccat
aatattaaggacatgaaactgctacagacgttgctagacaccccaaggaacccccacggc
ctctgtgctctgtctataaaccattccaactcctacttggcctatcccagtagctcctcc
tcaggagaagtctccttgtatgatgccaactccttgaaatgtgagtgcactatcccagcc
catgacagcccgcttgctgctattgccttcaactctacgggaacaaaactggctagtgct
tcagagaaaggtacagtgattcgcgtcttttccattcctgaagggcagaagctttatgag
ttccgcagaggaatgaagagatatgtaaacattagctctttggtattcagtatggattcc
cagttcctttgtgcctccagcaacacagagactgtccatgtcttcaaactagaacaactg
ccggagaggccagaggagaatgcctcctggacgggctatgtgggaaagatgtttatggct
gcttcaaactacctcccgacacaagtatctgacatgatgaaccaggatcgcgcctttgcc
acagtccggctacatttttcagggcagaagaacgcgtgcaccttggtcacaattcagaag
ctgcctcggctcttggtgacctcctccagcggccatctttatgtgtataacctggatccc
caggatgggggcgagtgcgttcttatcaaaaaacacagcctgttgggttcagcaaagtca
gagacagatggagacagcgatgcagacggccctgtacctgtttcctatgctgccactgtt
gccaggcccggctctgctgctgctgcatccaccataacaggttactctgaagacgggggc
gccctgcgaggtgagattattccggaacatgaactggcggtgggacctatttgcctggac
gacgagaaagaattcccacctgtgagcattaagaactcctaa
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