Xenopus laevis (African clawed frog): 446727
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Entry
446727 CDS
T01010
Symbol
vps36.L, vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
446727 (vps36.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
446727 (vps36.L)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xla04147
]
446727 (vps36.L)
Membrane trafficking [BR:
xla04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
446727 (vps36.L)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
446727 (vps36.L)
Exosomal proteins of colorectal cancer cells
446727 (vps36.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
G1_gp67_C
MA3
BBL5
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
446727
NCBI-ProteinID:
NP_001086892
Xenbase:
XB-GENE-6255362
UniProt:
Q6DDF4
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Position
2L:158706073..158727089
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AA seq
388 aa
AA seq
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MDRFSWCTGLLDIDETLVIQQRGVRLSDGEEKTKFDSGTLLLTTHRLIWRDQKNHDFCIA
FPLSQIVFTEEQAGGIGKSAKIVVHLHPATPNKEPGPYQTSRYSYVKLSFREHGQIEFQR
RLAEELTQRRWERLSASASPSMQMNKGPQTGRIKAVGIVGIERKLEEKRKETDKNISEAF
EDLSKLMEKAKEMVELSKSIATKIKDKQGDISEDETIRFKSYLLSMGIANPVTRETHGSG
THYHMQLAKQLATMLQAPLEERGGIMSLTEVYCLVNRARGMELLSPEDLVNACKMLESLK
LPIRLRVFDSGVMVIEHQSHNEEEMVASALETVSEKGSLTSEEFAKIVGMSVLLAKERLL
LAENMGHLCRDDSVEGLRFYPNLFLTQS
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcttctcatggtgcaccgggctgctggatatagatgagactctggtgatccag
cagcgcggggtgcgactgtcagacggagaagagaagaccaagtttgattcagggacgctt
cttttaacgactcacagactaatctggcgagatcaaaaaaatcatgatttctgcattgca
tttcctctgtcccagatcgttttcactgaagaacaggcgggaggtattggaaaaagtgct
aaaatagttgttcatctccatcctgcaactcctaacaaggagcctgggccttaccaaact
agtcgctactcctacgtcaagctgtccttcagagagcatggtcagatagagttccaacga
cgattggcagaggagctaacacaaagaagatgggagcgtttatcagcatcagcatcacca
tctatgcaaatgaacaaaggcccacagactgggagaatcaaggcagtgggaattgttggc
atagagaggaaactggaagaaaaaagaaaggagactgacaaaaacatttccgaggccttt
gaagacctcagcaagttgatggaaaaggcaaaggaaatggtggagctgtctaaatcaata
gctaccaagattaaagataaacaaggggacatttcagaggacgagacaattcggtttaag
tcgtatttgctgagcatgggaatagccaatccagtcacacgggaaactcatggatctggc
acgcactatcatatgcaactggcaaagcagctggcgacaatgttacaggctccattggag
gagcgagggggcataatgtccctaacagaagtttactgcttagttaatcgcgccagagga
atggagttgctgtcaccagaggatttggtcaatgcctgcaaaatgctggaatctcttaaa
ctcccaataaggcttcgtgtgtttgatagcggagttatggtgatcgaacaccagtcccat
aatgaagaggaaatggtggcttctgctttagaaacggtttcagaaaaaggctcacttacc
tctgaagaatttgccaagattgttggaatgtcagttcttctggccaaagagaggctgctt
cttgcagaaaacatgggacacctttgtagagatgactcggtagaaggcttgcgcttttat
ccaaacctgtttttgacacagagttag
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