Xenopus laevis (African clawed frog): 446787
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Entry
446787 CDS
T01010
Symbol
hmbox1.L, hmbox1, hmbox1-a, hmbox1-b, hnf1la, pbhnf
Name
(RefSeq) homeobox containing 1 L homeolog isoform 2
KO
K24885
homeobox-containing protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
446787 (hmbox1.L)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
446787 (hmbox1.L)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
HTH_24
AbiJ_NTD3
HTH_31
CUT
HTH_26
HTH_37
DUF494
TBPIP
HTH_23
Motif
Other DBs
NCBI-GeneID:
446787
NCBI-ProteinID:
NP_001086952
Xenbase:
XB-GENE-6254831
UniProt:
Q6DD14
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Position
5L:complement(163531179..163583321)
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AA seq
405 aa
AA seq
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MSHYTDEPRFTIKQIDLLQRLRRTGMTKNAILHALETLERLDQEHSDKFGRRSTYGTSSY
STNNVPASSSTATASTQTLHGGMSPSPSNSCDTSPQPCTTNQNGRESSERVATSNGKLSP
TRYHANSIGPRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEIKAFLANRRISQAVVAQV
TGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNPGATLSMRPAPIPIDTDAEWRQT
PPPVTATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACNAVIQKPGK
KLSDLERVTSLKVYNWFANRRKEIKRRANIAILESHGIDVQSPGGHSNSDDVDGNDYSEQ
DDSTSHSDHQDPISLAVEMAAVNHTILALARQGTGEIKTEALDDD
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtcacattacacagatgaacctcgatttacaataaagcaaatagacctcttacagcgg
ctgcggcgcacgggaatgaccaagaatgcgattctccatgcgctggaaacgttagagcgg
ctcgaccaagagcacagtgataaattcggcaggaggtccacctacgggactagttcctac
agcaccaacaatgtaccagcctcttcctctacagccaccgcttccacccagacccttcat
ggtgggatgtctccctccccaagcaacagctgcgacacctccccacaaccttgcactacc
aatcagaacgggagggaaagcagcgagagagttgccacatccaatggcaagttgtccccg
acgcggtatcatgcaaatagcatcggcccaaggtcgtacagcttcgaagcctccgaggaa
gatctggatgtggatgacaaagttgaagaacttatgaggagggatagcagtgtcatcaaa
gaagaaatcaaggcatttcttgccaacagaagaatatcccaagccgtggttgcacaagtg
actggtatcagtcagagcaggatctctcactggctgctgcagcaaggctccgacctgagt
gagcagaagaaaagggcgttttaccgatggtaccagctggagaaaactaaccctggtgca
acactaagcatgcgacctgcccctatccccatagacacagacgcagaatggagacagacc
ccgcctcccgtcaccgctacttctggtacctttaggttacggaggggaagtcgctttacc
tggaggaaggagtgcttggctgtgatggaaagctattttaatgagaaccagtacccggac
gaggccaagcgagaggagattgcaaacgcctgcaacgctgttatacagaaaccaggcaag
aaactgtcggatctggagcgggtcacctccctgaaagtgtacaactggttcgctaatagg
aggaaggagataaaaagacgagccaacattgcaatcctggagagccatgggatcgacgta
cagagtcccgggggtcattcaaacagcgacgacgtggatggaaatgattattcggaacag
gacgacagtacgagccatagcgaccatcaagacccaatctcattagcggtggaaatggca
gccgtcaatcacaccatcttggcactggcccggcaaggcaccggcgagatcaagacagag
gctctggacgacgactga
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