Xenopus laevis (African clawed frog): 446865
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Entry
446865 CDS
T01010
Symbol
actn4.S, actn4, actn4.L
Name
(RefSeq) actinin alpha 4 S homeolog
KO
K05699
actinin alpha 1/4
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04510
Focal adhesion
xla04520
Adherens junction
xla04530
Tight junction
xla04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
446865 (actn4.S)
04520 Adherens junction
446865 (actn4.S)
04530 Tight junction
446865 (actn4.S)
09142 Cell motility
04810 Regulation of actin cytoskeleton
446865 (actn4.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
446865 (actn4.S)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
446865 (actn4.S)
04147 Exosome [BR:
xla04147
]
446865 (actn4.S)
Membrane trafficking [BR:
xla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
446865 (actn4.S)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
446865 (actn4.S)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
446865 (actn4.S)
Exosomal proteins of colorectal cancer cells
446865 (actn4.S)
Exosomal proteins of bladder cancer cells
446865 (actn4.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CactinC_cactus
XisI
Motif
Other DBs
NCBI-GeneID:
446865
NCBI-ProteinID:
NP_001087030
Xenbase:
XB-GENE-494343
UniProt:
Q6DCS8
LinkDB
All DBs
Position
8S:complement(86170004..86225648)
Genome browser
AA seq
904 aa
AA seq
DB search
MVDYHVTGGGAPNNIGQLGQEQRYMEQEDTWDRDLLLDPAWEKQQRKTFTAWCNSHLRKA
GTQIENIDGDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDYIASKGVKLV
SIGAEEIVDGNTKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQN
FHISWKDGLAFNALIHRHRPELIEYDKLRKDDPVTNLNNAFEVAERYLDIPKMLDAEDIV
NTARPDEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYEKLASDLLE
WIRRTIPWLENRVPEKTMQDMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLS
NRPAFMPSEGKMVSDINNGWQHLEQSEKGYEEWLLNEIRRWERLDHLAEKFRQKAAIHEA
WTEGKEAMLKQKDYESATLADIKALIRKHEAFESDLAAHQDRVEQIAAIAQELNELDYYD
SPSVNARCQKICDQWDLLGSLTHSRRDALEVTEKQLETIDQLYLEYAKRAAPFNNWMEGA
MEDLQDMFIVHTIEEIEGLIAAHEQFKSTLPDADREREAILDIQNEAQKIADYNHIKLAS
GNPYTSVTPQIINAKWEKVQQLVPKRDGALNGEQDKQQSNEHLRLQFGNLANVVGPWIQA
KMEEIGRIAIEMHGTLEDQMSHLKQYEQSVINYKPNIDKLEQQHQLIQEALIFDNKHTNY
TMEHIRVGWEHLLTTIARTINEVENQILTRDAKGISQEQMHEFRASFNHFDKDHTGALGP
EEFKACLISLGYDVENDRQGDAEFNRIMAIVDPNNSGMVTFQAFIDFMSRETTDTDTADQ
VIASFKVLAGDKNYITAAELRRELPPDQAEYCIARMAPYQGADAVPGALDYMSFSTALYG
ESDL
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggtggattatcacgtgaccggcggaggggcgcccaataacataggccagctgggacaa
gagcaacgctatatggaacaagaggacacctgggaccgggacctgttgctggacccagcc
tgggaaaagcagcagaggaagacattcacagcatggtgcaactcccatctaagaaaagcc
ggaacacagatagaaaatattgacggggatttcagagatgggttgaagctcatgttacta
ctggaagtcatctcaggagaacggctgcccaaaccagagcgaggaaagatgagggtgcat
aagatcaacaatgtcaacaaagccttggattacattgcaagtaaaggggtgaagttggtt
tccatcggagcagaagaaatcgttgatggcaatacaaagatgactttaggaatgatctgg
acaattatcctgcggtttgcaattcaggacatatctgtagaagaaacctctgcaaaggag
ggacttcttttgtggtgccagaggaagacggccccttataagaatgtcaatgtgcagaac
ttccacatcagctggaaggatgggttggctttcaatgcccttatccatagacatcgccca
gaactgatagagtatgacaagctgagaaaggatgaccctgttactaacctaaataacgct
tttgaagtagcagaaagatatctggacattccgaagatgttggatgctgaagacattgtc
aacactgctcgtcctgatgagaaggcaatcatgacatacgtgtcctctttctaccacgcc
ttctctggagctcagaaggccgagacagccgctaacagaatatgcaaagtactggctgta
aatcaagaaaatgaacatctaatggaggactatgaaaagctggctagtgatcttttggag
tggatccgtcgtacaatcccctggttggagaatcgtgtaccggaaaagactatgcaagac
atgcagcaaaagctggaggatttcagagattaccgccgcgtgcacaaaccaccgaaggtg
caagagaagtgccagttagagatcaacttcaacaccctgcaaacaaaattgaggctcagt
aatcgccctgcctttatgccatcggagggcaagatggtttcggatattaataatggatgg
cagcacttggagcagtctgagaaaggctatgaggagtggcttttgaatgaaatcagacgg
tgggagagactggaccacttagcagagaagtttagacaaaaagccgccatccatgaggcc
tggacagaaggcaaggaggccatgctaaagcagaaagattacgaaagtgccacccttgca
gacataaaggcacttatacgaaaacatgaagcatttgaaagtgaccttgcagcccaccag
gatcgtgtggaacaaatagcagccattgcacaggaattaaacgagttggattactatgac
tcccccagcgtcaacgctcgttgccagaagatttgtgaccagtgggatctcctgggctcc
ttaacacacagcaggagagacgccttagaggtaacggagaaacagttggaaacaattgac
cagctgtacctggaatatgccaagagagccgcaccgttcaacaactggatggaaggagct
atggaggatttgcaggacatgtttatagtgcacaccattgaggagattgagggtctgatt
gcagctcatgagcagttcaagtccactcttcccgatgccgaccgcgagagagaagccatt
ctggacattcagaacgaagctcagaaaattgccgattacaaccacatcaaactagccagt
gggaatccttacacgtccgtaactccgcagattattaacgcaaaatgggagaaggttcag
cagcttgtccccaagagggacggtgcattgaatggagagcaggacaaacagcagtcaaat
gagcacctgcgtttgcagtttggcaatctagctaatgtggtaggaccttggatacaggcc
aagatggaggagattggcaggattgctatagagatgcacgggactctggaagaccagatg
agccacctgaagcagtatgaacagagtgtcatcaattacaagcccaacattgacaaactg
gagcagcagcatcagctcatccaggaagccctgatctttgataacaagcacaccaactat
accatggagcacatccgcgtaggctgggagcatcttctcactacaatagctcgcacgatt
aatgaggtggagaaccagatcctgacccgggatgccaagggcatcagccaggagcagatg
catgaattccgagcgtcgttcaatcactttgataaggatcatacaggcgcattgggacct
gaagaattcaaagcatgtctcatcagtctgggatatgatgtggaaaatgacagacaggga
gatgccgagtttaaccggatcatggctatcgttgaccccaacaactccggcatggtcact
ttccaagcattcatcgacttcatgtcccgagagacgacagacacggacacagctgaccaa
gtcattgcctcttttaaggtcctggctggagataaaaattacatcactgcagcagagctg
cgcagagaactcccgccggatcaggccgagtattgcatcgctcgtatggccccctaccag
ggagctgacgcagtgcctggagcactcgattacatgtccttctctactgctttgtatggc
gagagcgacttgtga
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