Xenopus laevis (African clawed frog): 446868
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Entry
446868 CDS
T01010
Symbol
des.1.L, cmd1l, csm1, csm2, des-b, des.1, des.1-a, des.1-b, desm
Name
(RefSeq) desmin, gene 1 L homeolog
KO
K07610
desmin
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04519
Cadherin signaling
xla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
446868 (des.1.L)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
446868 (des.1.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
446868 (des.1.L)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
446868 (des.1.L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
ZK652
DUF7491
KIF21A_4th
BT4734-like_N
CCDC89
COLEC12
MHC_I_3
DUF8429
Trimer_CC
Motif
Other DBs
NCBI-GeneID:
446868
NCBI-ProteinID:
NP_001087033
Xenbase:
XB-GENE-494935
UniProt:
A0A8J0PZF5
Q6AZI8
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All DBs
Position
9_10L:62045630..62054527
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AA seq
458 aa
AA seq
DB search
MSQSYSSSQRVSSYRRTFGGGSPSFSTRSSFGSKGASANSMSSRVYQVSRSAAAPSLSSF
RATRVAPVRSSYGADVLDFSLADAMNQEFLHTRTNEKVELQELNDRFVNYIEKVRYLEQQ
NQILVTEVNKLKGKEPTRVNELYEEEMRELRRQVDLVTNQRARVEVERDNLVDDLHRLKQ
RLQEEIQLKEDAENNLAAFRSDVDAATLARIDLERRIESLQEEIAFLKKIHEEEIRELQA
QLQEQQVQVEIDVSKPDLTAALRDIRAQYETIAAKNVSEAEEWYKSKVSDLNQAAQKNND
ALRQSKQEMMEYRHQIQSYTCEIDALKGTNDSLLRQMRDQEERFSGEAAGYQDNVGRLEE
EIRNMKDEMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRITLPIQTYSALSFRETS
PEQRSSEVHTKKTVMIKTIETRDGEVVSEASQQHQEIM
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagccagtcctactcaagcagccagagggtttcctcctaccgccgcacttttggaggg
ggatccccatcattcagcaccaggtcctcctttgggtctaagggagcctccgctaattca
atgtcttctagagtataccaagtttcccgatctgcagctgccccaagcctctccagtttt
agggcaacaagggtcgccccagtgagaagcagctatggagcagatgttttggacttcagt
cttgcagatgcaatgaaccaggagttcttgcatacccgaaccaatgaaaaggtggagctg
caggagctgaacgacaggtttgtaaactatattgagaaggttcggtaccttgagcaacag
aaccagatccttgtgactgaagtcaacaaactaaagggaaaggagccaaccagggtgaac
gagctgtatgaggaagagatgagggagctgcgccgtcaagtggaccttgtgaccaatcag
agggcacgagtggaggtagaaagggacaacctggtagacgacctacacagacttaaacaa
agattgcaggaggagatacagttgaaggaagatgcagagaacaatctcgctgctttcaga
tcggatgttgatgcagccactctggcccgtatagacctagagagacgcatcgagtctttg
caggaggaaattgcattcctgaaaaagattcacgaggaggaaatccgggaactgcaggca
cagttacaagagcaacaggtgcaagtggagatagatgtttccaaaccagacctgacagca
gcactcagagatatccgggctcagtatgagaccatcgccgccaagaatgtttctgaagct
gaggagtggtacaagtccaaggtcagtgacctcaaccaggcagcacagaagaacaacgat
gccctgcgccagtccaagcaagaaatgatggagtaccgccaccaaattcagtcctacacc
tgcgagattgatgcacttaagggaacaaatgactccctgttgcgacagatgagggaccaa
gaggaaaggttttctggggaagctgctgggtaccaggacaacgttggacgtttagaggaa
gagatccgtaatatgaaggatgaaatggcaaggcatctccgcgagtatcaggatctcctg
aacgtcaagatggcactggatgtggaaattgccacataccgtaaactgctagagggcgag
gagagcaggatcactcttcccatccaaacctattctgcactcagtttcagagaaaccagc
ccggaacagaggtcttcagaagttcatacaaagaaaacagtcatgatcaaaacaattgag
acccgggatggtgaggttgtgagtgaggcttcccagcagcaccaggagattatgtaa
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integrated database retrieval system
