KEGG   Xenopus laevis (African clawed frog): 446884
Entry
446884            CDS       T01010                                 
Symbol
xndc1.l
Name
(RefSeq) Xrcc1 N-terminal domain containing 1 L homeolog
  KO
K10803  DNA-repair protein XRCC1
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    446884 (xndc1.l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xla03400]
    446884 (xndc1.l)
DNA repair and recombination proteins [BR:xla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     446884 (xndc1.l)
SSDB
Motif
Pfam: XRCC1_N
Other DBs
NCBI-GeneID: 446884
NCBI-ProteinID: NP_001087049
UniProt: Q6DCQ9
LinkDB
Position
2L:179871876..179878231
AA seq 392 aa
MAPITIKHIVSFSSQDPKHPAENLLSESSLLPWLISSRERSGCLRVELQLEKASHIAYID
IGNCGSALVQIDVGRSSWPLDRTYVTLLPTTTLMSPADSKQSRNPNGVRMFKKGDFLADV
RAELWDRVRISASQPFNKRQLFGLSFIRFRSALDEEQQDNEEQRHKSEDPPKNKTLGSQT
PRHTESPPEAEGQKSKDQLPPSIISPRVAAPNSLSRTARMVLTAAKSRKRRFPDTTPPVL
PSLHMLGEKSSGFSPPPTPPQEEPRKPHGRRRLRMEPPPGRARGPVLERQAAELGGSNPG
IQRAAEKQHDCSNCPICGGYFQLHYLPFHAATCGEEPPARVITVSSSDDSSDDDVNKNFI
VPEQPDSRVSCPICGFYFPSSEIQIHANTCGE
NT seq 1179 nt   +upstreamnt  +downstreamnt
atggcccccattacaatcaagcacattgtgtccttcagctcacaggatcccaaacacccg
gcggaaaatctcctgagtgagagttcgttgctgccctggctgatctcctcccgggagcgg
agtgggtgcctgagggtggagctgcagctggagaaggcgagtcacatcgcttacattgat
atcgggaattgcggttctgccttggtgcagattgatgtgggtcgctccagttggcctttg
gacagaacctacgtgactctgctccccaccaccaccctcatgtcccccgcagattccaag
cagagcaggaaccccaatggggtgcggatgttcaagaaaggggactttctggccgacgtc
agggcggagctgtgggaccgcgtgcggataagcgccagtcagcccttcaataagcgacag
ttattcggcctttcgttcattcgcttccgatctgctctggatgaggagcaacaggacaac
gaggagcagcggcataagagtgaggatccccccaagaacaaaactctcggctcacagacc
ccccgacatacagagagccccccagaggcagaagggcagaagagcaaagaccagttgccc
cccagtatcatttctccccgtgttgccgccccaaactctctgagccgcacggcacgcatg
gtcctgactgcagccaagtctcgcaagcgccgattcccagacacaacccccccagtcctg
ccttcactccacatgctgggagaaaagagcagcggcttcagcccccctcccaccccccca
caggaggagcccaggaagccgcatggcaggaggagactgaggatggagccccccccgggg
agggcgcgaggtccagtactggagagacaggcagctgagttggggggcagtaaccctggg
atacagagagcagctgagaaacaacatgactgcagcaactgccccatatgtggaggatac
ttccagctgcattaccttcccttccatgccgccacgtgtggggaggagcctcctgccaga
gtcattactgtgtcttcatcagacgattcttccgacgacgacgtcaacaaaaactttatt
gttcctgagcagccggactcccgggtctcctgccccatctgtggcttttacttccccagc
tccgagatacagattcatgccaacacctgcggggaatag

DBGET integrated database retrieval system