Xenopus laevis (African clawed frog): 446893
Help
Entry
446893 CDS
T01010
Symbol
ccdc47.S, ccdc47
Name
(RefSeq) PAT complex subunit CCDC47 precursor
KO
K24962
PAT complex subunit CCDC47
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
xla03110
]
446893 (ccdc47.S)
04131 Membrane trafficking [BR:
xla04131
]
446893 (ccdc47.S)
Chaperones and folding catalysts [BR:
xla03110
]
Other chaperones and cochaperones
Others
446893 (ccdc47.S)
Membrane trafficking [BR:
xla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
446893 (ccdc47.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC47
Motif
Other DBs
NCBI-GeneID:
446893
NCBI-ProteinID:
NP_001087058
Xenbase:
XB-GENE-6255087
UniProt:
Q6AZI2
LinkDB
All DBs
Position
9_10S:complement(5808683..5825331)
Genome browser
AA seq
489 aa
AA seq
DB search
MILFTRLLAVSLLLVSGAFAKFQEFDDSDDVAEYDDNDFAEFEDAADEAPTLRPPSQQVP
EKEDEIEDDDEEEEEATVELEGQEEFEEDTEGQEGDADAEPYDDEEFENYDDRLDTGTPN
KNNDPITIVDVPAHLQNSWESYYMEILMVTGLLAYIMNYIIGKNKNSRLAQAWFNSHREL
LESNFSLVGDDGMNKDAVSTGMLNQENDHIYNMWCSGRLCCEGMLIQLKFIKRQDLLNVL
SRMMRPVCDQVQIKVTMNDEDMDTYVFSVGTRKTLIRLQKEMQDLSEFCGDKPKSAAKMG
LPESMAVLAEMGEVTDGIMDTKMVHYLTNYSDKIESIHFSDQFSGPKIMQEEGQPLKLPE
TKKTLLFTFNVPGSGNASVKDMEALLPLMNMVIYSIDKVKKFRLNREGKQKADKNRARVE
ENFLKITHVQRQEAAQTRREEKKRAEKERIMNEEDPEKQRRLEEAAQRREQKKIEKKQMK
MKQIKVKAM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgatcttatttacccgtctcctggccgtttcccttctcctggtctccggggcctttgcc
aagtttcaggagtttgacgacagcgatgatgtagcagagtatgacgacaacgactttgcc
gagttcgaggacgctgcggatgaggcgcccaccctacgccctccaagccagcaagtccca
gagaaagaggacgaaattgaggatgatgatgaagaggaggaggaggcgacggtagagctg
gagggacaagaggaattcgaggaggatacagaaggacaggaaggcgacgccgacgctgaa
ccgtatgatgatgaagagtttgagaattatgacgacaggttggataccgggactccaaac
aagaataacgacccgattaccatcgtggatgttcctgctcacctacagaacagctgggag
agctattacatggagatccttatggtgactgggctgttggcctacatcatgaactacatc
attggcaaaaacaaaaacagccggctagcacaggcctggttcaactctcacagggagctc
ctggaaagcaacttctctcttgtgggggatgatggaatgaataaggatgctgtaagtaca
ggaatgctgaaccaggagaatgatcacatctataatatgtggtgctcagggaggctgtgc
tgtgagggcatgctgattcaactcaagtttattaagcgccaggacttacttaatgtgttg
tctcgtatgatgcgccccgtgtgtgatcaagtgcaaataaaagtgacaatgaatgacgaa
gacatggacacgtacgttttttctgtggggactcggaaaacgctgatcaggttgcaaaag
gagatgcaggacttgagtgaattttgtggtgacaaacctaaatctgctgctaagatgggt
cttcctgagtccatggccgtccttgctgagatgggggaggtgacagacggtattatggat
accaagatggttcactatctcacaaattattccgataaaatagagtccatccacttctct
gaccagttctccggtccaaagatcatgcaagaggaagggcagccactaaaactcccagag
accaagaaaactcttctgtttacatttaatgtgcctggttctggaaatgcatctgtgaaa
gatatggaggcccttctaccactgatgaatatggtgatttacagtattgataaggttaaa
aaattccgtctaaaccgagaggggaagcaaaaagctgacaagaatcgtgcccgagtcgaa
gaaaacttcctgaagatcactcacgtacaacgccaggaggcggctcagacccgccgtgaa
gagaagaagcgggcagagaaagaacgcatcatgaacgaggaggatcctgagaaacaacgg
cgtctagaggaagctgctcagcgtcgagagcaaaagaagatagaaaagaagcaaatgaag
atgaagcagatcaaagtaaaagccatgtaa
DBGET
integrated database retrieval system
