Xenopus laevis (African clawed frog): 446990
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Entry
446990 CDS
T01010
Symbol
ss18l1.S, crest, ss18l1
Name
(RefSeq) calcium-responsive transactivator
KO
K15623
protein SSXT
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
446990 (ss18l1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
446990 (ss18l1.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
446990 (ss18l1.S)
GBAF(ncBAF) complex
446990 (ss18l1.S)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
446990
NCBI-ProteinID:
NP_001087101
Xenbase:
XB-GENE-993778
UniProt:
Q6DDK1
A0A974BST4
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Position
9_10S:complement(13651369..13666398)
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AA seq
403 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNMNLGPGGMSQTGPSQTLHSQGNLSEALGSSLPPSSIMQ
GQISNGPNHVSMQQSGQTTLPTTTMSMAVSTHGSAPGYSHTVPSSQNVPMQNQGSIGNYV
SRANMNMPSNPVTMMHQQATSSHYTSAQAGSQHYQGQPSIAMMNQSSQGSSMMGQRPLGP
YRPSQQGSSQQYLGQEEYYSEQYGHSQGSSEAMTPQYYTDAGHGDYSYQQSSYGEQSYER
TFEDSSQHYYEGGNAQYSQQQTGYQQGSGQQQAYSQQQYSNQQNYPGQQQGYVPAQGASS
QYSGYQQGQGQQYASYRTSQTTSTAQQQRPYGYEQGQYGNYQQ
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggcctttgcatcagccagacccagaggcaagggagaggtcacccagcaaact
atccagaagatgctggatgaaaaccatcacctaatacaatgtatcatggattatcagagc
aaaggcaagactgctgagtgtactcaataccaacaaatcctgcacagaaacctagtgtat
ttagccacaattgccgactctaaccagaacatgcagtctcttcttcctgcgcctcccact
cagaatatgaacctgggaccaggagggatgtcccagacaggccccagccagaccctgcac
tctcaagggaacttgagtgaagctttgggatccagcctgccaccttcttcaattatgcag
ggtcagatcagcaatggaccaaaccatgtgtccatgcagcagtctggccaaaccactttg
cccaccactaccatgagtatggctgtgagtacccatggcagtgcccctggatatagccac
accgtgccaagctctcagaatgtgcccatgcagaatcaagggagcattggcaattatgtg
tcaagagcaaacatgaacatgccaagcaacccagtgaccatgatgcaccagcaggccaca
agctcccattacacttcggcacaggcaggcagccagcattaccagggacagccttcgatc
gccatgatgaaccagagcagtcaaggaagcagcatgatgggccagagaccacttggaccc
tacaggccctctcagcaaggctcttcccagcagtacctggggcaggaggaatattacagc
gaacagtatggccacagtcaaggctcttcagaagccatgaccccacaatactacactgat
gcagggcatggggactactcctaccagcagtcgtcatatggggagcagagctacgagcgg
acgtttgaggattcctctcagcattactacgagggaggaaatgcgcagtacagccagcag
cagacaggataccagcaagggagtggccagcagcaggcgtattcacaacagcaatactct
aatcaacagaactaccctgggcagcagcaaggatatgttccagcacaaggggcatcctct
caatattctggctaccagcaaggtcaaggccagcagtatgccagctaccggacttcccag
acgacatccaccgcccagcaacagaggccttatggctatgagcagggtcagtatggaaat
taccagcaataa
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