Xenopus laevis (African clawed frog): 447009
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Entry
447009 CDS
T01010
Symbol
ythdf2.L, ythdf2
Name
(RefSeq) YTH N(6)-methyladenosine RNA binding protein 2 L homeolog
KO
K20102
YTH domain-containing family protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
447009 (ythdf2.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
447009 (ythdf2.L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
447009
NCBI-ProteinID:
NP_001087120
Xenbase:
XB-GENE-977195
UniProt:
Q6DCK2
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Position
2L:<60383189..60396724
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AA seq
493 aa
AA seq
DB search
MSASSLLEPRPKGQGNKVQNGSLHQKDGLNDDEFEPYLHTQERQNNAYTALSDSYLPSYY
SPSISFSYSLGEGAWSTGGDPPPTMPYLTSYGQLSNGEPHFLPDAVFGPLGSAPFLGQPG
FNFFPSGVDFSAWGNGGNSPGASAPSSGYGGSYAYAPSTLGGAVLEGQASFGGGKAVGSL
EQGMGALKLSGEGGGLKAAVGSLPPAAVAPPKQTSWADIASKPAKQSLSKILPPPPTSKH
NMEIGTWDNKVSSVSACQTLSPPMLQQTIPNAATAPHAPTRWSAHRNRISEQTQLAPSTA
EPHPVLEKLRSVNNYNPKDFDFSLKLGRVFIVKSYSEDDIHRSIKYNIWCSTEHGNKRLD
AAYRSLNGKGPLYLLFSVNGSGHFCGVAEMRSAVDYNTCAGVWSQDKWKGRFDVRWLFVK
DVPNGQLRHIRLENNDNKPVTNSRDTQEVPLEKARQVLRIIASYKHTTSIFDDFSHYEKR
QEEEDSVKKVIKN
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccagtagtcttttggagccgagacctaaaggacaaggaaataaagtgcaaaat
ggatctctacaccaaaaagatggcttgaatgatgatgaatttgagccatatttgcatacg
caagagcggcagaacaatgcttacacagctctgtccgactcatacttgccaagttattac
agtccatctatcagtttctcatactccctgggggagggagcttggtctactggaggtgac
cctccacctactatgccgtacctaacttcctatggtcagctgagcaacggagaaccgcat
tttttaccagatgctgtgtttggaccgttgggcagtgccccgtttctaggacagcctggg
ttcaacttctttccaagtggtgtagacttctcagcttggggcaatggaggcaactcccca
ggagcctctgctcctagttctggatatgggggaagctatgcatatgcccctagcacttta
gggggagctgtattggaggggcaagcaagctttggtgggggaaaggcagtgggaagtcta
gaacagggaatgggggcactgaaactgagtggagaagggggtggtctgaaggcagctgtg
ggtagcctgccacctgcagctgtggcaccacccaaacagacatcttgggcggacattgca
agcaaacctgctaagcaaagcctttctaaaattcttcctcctcctccaacctccaaacac
aacatggaaattggaacttgggacaacaaagtttcgtcagtcagcgcttgccagacatta
tctccaccgatgcttcagcagactatacccaatgctgccactgctccccatgcccctaca
cgttggtctgcccatcgtaacagaatctcagagcagactcagcttgcaccttcaactgct
gagcctcaccctgtcctggagaaattgcgttcagtcaacaactacaatcccaaggacttt
gatttcagccttaaacttggtcgtgtgtttattgtaaagagctattcagaggatgacatt
caccgctccatcaagtacaatatttggtgttccacagaacatggcaacaagcgtcttgat
gcagcttatcgctctcttaatgggaagggtccactttacctgctttttagtgttaatggt
agtggccacttctgtggagtagcagaaatgcgctcagcagtagactataatacttgtgcg
ggagtgtggtcacaggacaaatggaagggccgctttgatgtgcgctggctgtttgtcaag
gatgtacctaatggacagctacgtcacattcgtctagagaataatgacaacaagccagtc
accaactctcgggacacacaggaggtcccattggaaaaagcacgtcaggtgcttcgaatc
atcgccagctacaagcacacaacctccatctttgatgacttctctcattatgagaaaaga
caagaggaagaggatagtgtcaaaaaggtgatcaagaattag
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