Xenopus laevis (African clawed frog): 447036
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Entry
447036 CDS
T01010
Symbol
tnpo3.S, tnpo3
Name
(RefSeq) transportin 3 S homeolog
KO
K15436
transportin-3
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03013
Nucleocytoplasmic transport
xla03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
447036 (tnpo3.S)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
447036 (tnpo3.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xla03016
]
447036 (tnpo3.S)
Transfer RNA biogenesis [BR:
xla03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
447036 (tnpo3.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
Importin_rep_3
Motif
Other DBs
NCBI-GeneID:
447036
NCBI-ProteinID:
NP_001087147
Xenbase:
XB-GENE-998618
UniProt:
Q6DCG8
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Position
3S:64408851..64445077
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AA seq
922 aa
AA seq
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MEGKPGLQTVYQAVQALYHDPDPSGKERASLWLGELQRSVYAWEIADQLLQIHQDVESCY
FAAQTMKMKIQTSFYELPSDSHVSLRDSLLSHIQNLKDMSPVILTQLALAIADLALLMAS
WKGCVQTLVESYSNDATSLPFLLEILTVLPEEVHSRSLRIGANRRAEIIQDLAYYSSTVV
SLLLSCAEKAGDNEKMLIKIFKCLGSWFNLGVLDSNFMANNRLLLLLFQVLQQDQTPTNL
HEAASDCVCSALYAIENIENNLPLATQLFQGVLTLETAYHMAVAREDIDKVLNYCRIFTE
LCETFLEKIVTTPCRDLGDLRTLEFLLICAGHPQYEVVEISFNFWYRLGEHLYKTTDTVI
HSIFKPFIQRLLHALARHCQLDSDHEGVPEETDDFGEFRLRVSDLVKDLIYLVGSMECFS
QLYSTLKDGNPPWEVTEAVLFIMAAIAKSIDPENNPTLVEVLEGVVRLPESVHIAVRYTS
IELVGEMSEVVDRNPQFLDPVLAYLMKGLCQPTLASPSAKAIQNICSVCRDHMALHFNGL
LEIARSLDSFTLHPDAAVGLLKGTALVLARLPLEKISECLSELCSVQVNSLKKLLSQDPN
NGLSSDPTLFLDRLAVIFRHTNPIVENGQTHPCQKVIHEIWPVLSETMNKHRSDNRIVER
CCRCLRFAVRCVGKGSASLLQPLVTQMVEVYHIHQHSCFLYLGSILVDEYGMEEGCQQGL
LDMLQALCVPTFQLLEQQNGLRNHPDTVDDLFRLFTRFVQRCPIVLLRSQVVIHVLQWGV
AATTLDHRDANCSVMKFLRDLIHTGVSNDHEENFDIRKDLIQQVLAQVGLQLVSQLIHAC
CFCLPPYTLPDVAEVFWEAMIFDRPTFCRWLESSLKSLPKEISGGAVTVTHKQLTDFHKQ
VTSAEECKQVCWALRDFTRLFR
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggaggggaagcccggcctgcagacggtatatcaggccgtgcaggccttgtaccacgac
ccggacccaagcggcaaagagagggcctcgttatggctgggggagctacagagatcggtc
tatgcttgggagattgcagatcagcttctgcagatacaccaggatgtggaatcatgctat
tttgcagcacagacaatgaaaatgaagatccagacctctttctatgagttaccttctgac
tctcatgtctccctgagggattctcttttgtcacatatacagaacttgaaagacatgtct
ccagtcattttaactcagctagctttggcaattgcagatctggccctgctgatggcttct
tggaaaggctgtgtgcagacactagtagaatcatacagtaatgatgctacatcattgccc
ttcctgctggaaattctaactgtacttcctgaagaagttcacagccgatcattacgcatt
ggggccaatcgtcgtgcagagattatacaggacttggcttactattcaagcactgttgtg
tctcttttgctgtcatgtgcagagaaggctggagataatgagaagatgctgatcaagata
tttaaatgcttgggcagttggtttaatttaggagtcctggacagcaactttatggctaat
aatcgccttttactactgctttttcaggttctgcagcaagatcagacaccaaccaacctt
catgaagctgcatctgattgtgtctgttctgcgctctatgccattgaaaatatagagaat
aatctaccacttgctacccaactctttcagggtgttcttacccttgagaccgcatatcac
atggctgtggctcgtgaggacatagacaaggtgctaaattattgtcggatttttactgaa
ctatgtgagaccttcttagagaagattgtgacaactccatgtcgtgatctgggagactta
aggactctagagtttctcctgatctgtgctggacatcctcaatatgaggtagttgaaata
tcctttaacttttggtatagactgggagagcacttgtacaaaacgactgatactgtcata
cacagtatcttcaaaccctttattcagaggcttctccatgctttggcaaggcactgccag
cttgattctgaccacgagggtgtccctgaggaaacggatgactttggcgaattccgtttg
cgggtatctgatttggttaaagatttgatctatctggtgggctccatggaatgtttctcc
cagctctattctactctaaaagatggaaatccaccttgggaagtgacagaagctgtactg
tttatcatggcagccattgctaagagtattgatccggagaataatcctacactggtggag
gttctggagggagtagtgaggctgcctgaatctgtgcatattgctgtgcgttacactagc
attgagcttgtaggggagatgagtgaggtggtggaccgaaaccctcagtttcttgaccct
gtactcgcctacttaatgaaaggcctgtgtcagccaacactagcttctccctctgccaaa
gccattcagaatatatgctctgtgtgccgggatcacatggcactgcactttaatggactt
cttgagattgctcggtctctggattcattcactctccatcctgatgctgctgtgggactt
ctaaaaggtactgcactcgtactggcccgtctgcccctggaaaagatttcagagtgccta
agtgagctgtgttctgttcaagtgaattcgcttaagaagcttctgtcccaagacccaaac
aatggcctttcttctgatcctacattgtttttggataggcttgcagtcattttcaggcat
accaaccctatagtggagaatggacagacccacccgtgccaaaaagtcatccatgaaatc
tggcctgtgttgtcagaaaccatgaacaagcaccgctctgacaatcgaattgttgagcga
tgttgtagatgccttcgctttgctgtgcgttgtgtggggaaaggatctgcttcactcctt
caaccattagtcacacagatggtagaggtgtaccatattcaccagcattcttgcttcctg
taccttggcagtatcctagtggatgaatatggaatggaggaaggttgccagcagggactg
ctggatatgctacaggctctgtgtgttccaacgtttcaactattggagcagcaaaatggt
ctccgaaatcacccagacactgtagatgacctgttcagactgtttaccaggttcgtacag
cgatgtcccatcgtcctgttgcgcagtcaggttgtgatccacgtgttgcagtggggtgta
gctgccactacactagaccaccgggatgccaactgtagcgtcatgaagtttctgcgtgat
cttatacacactggggtgtccaatgatcatgaagaaaactttgatattcgtaaggactta
atccaacaagttttggctcaagtaggactgcagttggtaagccagctaatccatgcttgc
tgcttctgccttccaccctacacactccctgatgtagcagaggttttctgggaggctatg
atctttgataggccgacattttgccgttggttggaatcctctctgaagagtttaccaaag
gagatttcaggaggagcagtaacagtcacacacaaacaattaacagatttccacaaacaa
gtcacaagtgctgaggaatgtaaacaggtttgttgggctctgagagatttcaccaggtta
ttccgatag
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