Xenopus laevis (African clawed frog): 447060
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Entry
447060 CDS
T01010
Symbol
strbp.L, strbp
Name
(RefSeq) spermatid perinuclear RNA-binding protein
KO
K13200
spermatid perinuclear RNA-binding protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
447060 (strbp.L)
Spliceosome [BR:
xla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
447060 (strbp.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
447060
NCBI-ProteinID:
NP_001087171
Xenbase:
XB-GENE-1005089
UniProt:
Q6DCD0
LinkDB
All DBs
Position
8L:complement(16122817..16244602)
Genome browser
AA seq
686 aa
AA seq
DB search
MRSIRSFANDDRHVMAKHSIIYPSPEELEAVQNMVSTVESALKQVSDWIDEQKCTKIENG
SPIKNESTEDSSAKDESGKVLCGVMRIGLVAKGLLIKDDMDLELVLLCKEKPSTRLLTTV
AENLPLQIQKITEETFQVEQCVEESSLLIQSSKEPKLTLKVILSSPLFREEEERPGGVEN
VAMKDPPDLLDRQKCLNALASLRHAKWFQARANGLKSCVIVLRILRDLCNRVPTWAQLKG
WPLELICEKAIGTCNRPLGAGEALRRVMECLAFGTLLPGGSGLHDPCEKEPTDALAYMTV
KEREEITHSAQHALRLLAFGQIYKVLQMDPLPSNKPFQKYSWSNSDREGSCLKRPFDDGS
SDEKDPNKKLKRNLSKILDSKPIDPNQPMNALMRLNQIRPGLQYKLLSQSGPVHAPVFTM
SVDVDGTTHEASGPSKKTAKLYVTVKVLQAMGYPTGFDTDLECLSSDEKSDSEGKNETSF
SSSSNITGNSNADNNTLEVRTQGPILTASGKNPVMELNEKRRGLKYELISESGGSHDKRF
IMEVEVDAQKFKGAGPNKKVAKASAALAALEKLFSGPNAVNNKKKKIIPQTKGVVSTAVS
AAVQAARGRGRVAMARGAFVGATAAAAPGYIAPGMRREEMHPEIFNGYAAPYAYSAATPA
YGIPKRMVLLPVMKFPAYPVPHYSFF
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgagatccatacggtcttttgcgaacgatgatcgtcacgtcatggcaaaacactccatc
atatacccgtctccagaggagctagaagcagtacagaacatggtgtcaactgtagaatct
gctctgaagcaggtctcggattggatagatgagcagaagtgtacaaaaattgagaatgga
tctccgatcaagaacgaaagcactgaggatagttcagccaaggatgaaagtggcaaagtg
ctatgtggagtcatgagaattggcctggttgccaaagggttgctaataaaagatgatatg
gatttagagctggttctcttgtgtaaggaaaagccatcaacaaggctgttaaccacagtt
gcagaaaacctccccctacaaattcagaaaatcacagaagaaaccttccaagtggaacaa
tgtgtggaggagtcatctcttcttattcaaagttccaaggaacctaaattgaccctaaaa
gtcatcctttcttcccctctgttccgagaagaggaggaaaggcctggtggagtagaaaat
gttgcgatgaaagatcctccggacttattggacaggcagaaatgcctgaacgccttggcg
tctctgcgacatgccaaatggtttcaggcaagagccaatggattaaaatcttgtgtaatt
gtactacgcattctgcgagatctgtgtaacagagtccctacctgggcacagctgaaagga
tggcctctggaacttatatgcgagaaggcaatcgggacttgcaataggccgcttggagca
ggtgaagccctacgacgggtcatggaatgcctagcttttggaactctcctccctggaggg
tcgggactgcatgacccctgtgagaaagagcctacagatgcccttgcttatatgacagta
aaagaaagagaggagatcacgcatagtgcacagcatgctctccgtttactggcctttgga
cagatatacaaagtcttacaaatggaccctctaccttctaataaacctttccaaaaatat
tcctggtcaaattcagacagagaaggttcttgtctaaaaaggccgtttgatgatggatca
tctgacgaaaaggatccaaataagaaattgaaacgaaacttgagcaaaattttagacagc
aaacccatagaccctaaccagcctatgaatgcactaatgcgacttaaccagattcgacct
ggtctgcagtacaagctcttgtcacagtctggtccagttcatgcaccagtcttcaccatg
tctgtggatgtagatggcacaacacatgaagcttctgggccatctaagaagacggccaaa
ctttacgtcacagtgaaggttttgcaagccatgggttaccctactggtttcgacacagat
ctggaatgcttaagttcagatgaaaagtcagacagtgaaggcaagaacgagacgtctttt
tccagctccagcaatattacaggaaactccaacgcagacaacaacaccttggaggtacgg
actcagggtcccatacttacagcaagtggcaaaaacccagtgatggagctcaatgagaaa
cgacgaggtctgaaatatgaattgatatcagaaagcggagggagtcacgacaagcgattt
attatggaggttgaggtagatgcacaaaaattcaagggagctgggccaaacaagaaggta
gccaaagctagtgctgcacttgctgctcttgagaagctcttctctggacctaatgcagta
aacaataagaagaagaaaattattcctcagactaaaggagttgtaagcacggcagtatca
gcagctgtacaagcagcccgaggaagaggacgagtagcgatggcacgaggtgcttttgtt
ggagctactgctgctgccgctcccgggtatatagcaccaggtatgagacgggaagaaatg
catcctgaaatatttaatggatacgcagccccatacgcttatagtgctgccactccagca
tatggtatccccaagagaatggttctgttaccagttatgaaattcccagcatatccagtt
ccgcactactcctttttttaa
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